Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1409 ATGGAGCAGCGACGGCGTTGGCACGACCTTTTCTGGTTAGGACTATTTGTGATCCAATTGATTGGTGTGGGTTTTGTTCTTGTGGTTCTAGGCCTCAACAGGTTCAAGAAGAAGGATAGGCTTGACATTGATAAGTACACCTACCGGTTCATGGAGAATCAGCCCGGGTTGACTGAGGATTACTGGCCGCTGTACGCGGTTGCTGGTGGTGTTGGGACTGCTCTTGGATGGAGCTGGTTGTTGCTGTTAGGCTCACGCGCCATCCAGATGATGAAGGTGTCGGTGCACATCCTCACCACTTATCTTGCAGTGATCAGTGTTTTGTGTTTCTGGGCTGCACAGTTTTTCTGGGGTGTTGCTTTTGCTGTTGGAGCAGCTCTGCAGTTCTTGTATGTAATATCTGTCATAGACAGACTTCCATTTACAATGTTGGTTCTGCAAAAGGCCGCCAAGATAGTATGGAATCTTCCTGAGGTTATGAGAGTGGCATACGCATTCATGCTGGCTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCTGCTGGTGTTGTGGCTTCAAGCATGGGTGACGGCGGACGCTGGTGGCTTCTTGTGGTCCTCTCTGTAAGCTTATTTTGGACAGGCGCTGTACTTTGTAATACTGTACATGTCATAGTGTCTGGGACGGTGGTTCTTGTTAGTATCCATGGTGGTAGCGAGGTCGCATCAATGCCCACGAACTCCGTATTGAAATCTTTACAATATGCTTTAACAACATCTTTTGGGAGCATTTGTTATGGCTCATTATTCACAGCTGCTATTAGGACTCTGCGATGGGAGATAAGAGGAATCCGGTCAAAGATAGGCAACAATGAGTGTTTGCTTTGTTGTGTCGATTTCCTTTTCCATCTTGTGGAGACTCTTGTCCGTTTCTTTAACAAGTATGCTTATGTCCAGATTGGTGTTTATGGTAAAAGCTTTAACCATTCTGCTAGAGATGCTTGGGAGCTATTCCAGTCAACTGGAGTTGAAGCAATTGTGGCCTATGACTGTTCAGGTGCTGTGCTGTTAATGGGAACCATTTGCAGTGGGCTGATAACTGGAACTTGCTCTGGTGTTTGGGCATGGATTAAATGGAGAGACAGAGCTCTTATGATTGGATCTACATCTATGCTCATGGGGATGATATTGGTTGGAGTGGCTATGGTATTGGTGGAAAGTGCGGTTACATCCATATATATCTGCTATGCAGAAGACCCTTTATTGATTCAGAAATGGGACCCTGACTTCTTCAACCAGATTTCTGAGACACTGCACCAGAGACTTAAGTATAGGAGTTCTCGCGGAAAGAAAGTTTTAACCCACAATCTACTTGAAGGCCGCACACTAGAAAACGCCTCTATGTGA 1389 0.4579 MEQRRRWHDLFWLGLFVIQLIGVGFVLVVLGLNRFKKKDRLDIDKYTYRFMENQPGLTEDYWPLYAVAGGVGTALGWSWLLLLGSRAIQMMKVSVHILTTYLAVISVLCFWAAQFFWGVAFAVGAALQFLYVISVIDRLPFTMLVLQKAAKIVWNLPEVMRVAYAFMLAVLLWMALWSFGAAGVVASSMGDGGRWWLLVVLSVSLFWTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTNSVLKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIGVYGKSFNHSARDAWELFQSTGVEAIVAYDCSGAVLLMGTICSGLITGTCSGVWAWIKWRDRALMIGSTSMLMGMILVGVAMVLVESAVTSIYICYAEDPLLIQKWDPDFFNQISETLHQRLKYRSSRGKKVLTHNLLEGRTLENASM* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1409 462 Pfam Plasma-membrane choline transporter 120 414 IPR007603 GO:0022857|GO:0055085
Lja2g1409 462 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 2 451 IPR007603 GO:0022857|GO:0055085
Lja2g1409 462 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 2 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1409 Lja-Chr2 13554114 13558517 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1409 2 13554114 13558517 Lja2g1409 2 13554114 13558517 ECH