Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1395 ATGGCTCTCAGTCACACTGCAATTCTGCAACTCTCAAGTTCATTTCATGGCGAAGCATCACCGTCTTCGTCAAATTCGGCATCCATTATGGGTTCCCCTCTTACCCTCTCACGCTCTACTCCACTTCCTGGAAACCAGTCACTTTCCAGGAAGCAATTTGTGGTTTTTGCTAGGAAGATGTCTGGGTTGGAGGAAGCTATGAAAATCAGGAGAGAACGTGAACTTCAAGTTGTGACAAAAGTTAAAAAAAGGCCTCCGTTAATGCGCGGAAGAGTATCACCATCGCTCCCTGTCCCTGATCACATACCAAGACCTCCTTATGTAGGTTTAAATATACTTCCTGAAATTGCAAGTGAGTATCAAATCCACGATTCTGAAGGTATAGCTCGAATGAGGGCTGCATGTGAGCTTGCAGCTCGTGTCTTAAAATTTGCAGGAACTTTGGTTAGGCCTTCTGTAACAACTAATGAAATTGATAAAGCAGTGCATCAAATGATAATTGATGCTGGTGCCTATCCCTCTCCCCTTGGCTATGGTGGATTTCCAAAAAGTGTGTGCACATCAGTTAATGAATGCCTGTGCCATGGAATACCTGATTCTCGGCAGTTACAGAATGGTGATATTATTAACATTGATGTGACAGTCTACCTGAATGGATATCATGGTGACACATCGAAGACATTTTTTTGTGGGGAAGTCAGTGATGCAATGAAAAACCTTGTTAAGGTAACTGAGGAATGCTTGGAGAAGGGAATAGCTGTTTGCAAGGATGGTGCTCCTTTTAAGAAAATTGGGAAGAGAATCAGTGAGCATGCCGAAAAGTATGGCTATGGCGTAGAGGAGCGTTTCGTTGGGCATGGTGTTGGAACAGTGTTTCATTCTGAACCGTTAATTTTTCATCACCGCAATGACAAGACAGGTTTCATGGTTGAAGGTCAAACATTTACAATTGAGCCTATTCTTACATTGGGAAGCACTGAATCCATTACATGGCCAGACAACTGGACAACATTATCCGCCGATGGTAGTCCGGCGGCACAGTTTGAGCATACCATTTTGATAACTAGGACCGGAGCCGAAATTTTGACTATATGTTGA 1098 0.4326 MALSHTAILQLSSSFHGEASPSSSNSASIMGSPLTLSRSTPLPGNQSLSRKQFVVFARKMSGLEEAMKIRRERELQVVTKVKKRPPLMRGRVSPSLPVPDHIPRPPYVGLNILPEIASEYQIHDSEGIARMRAACELAARVLKFAGTLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECLCHGIPDSRQLQNGDIINIDVTVYLNGYHGDTSKTFFCGEVSDAMKNLVKVTEECLEKGIAVCKDGAPFKKIGKRISEHAEKYGYGVEERFVGHGVGTVFHSEPLIFHHRNDKTGFMVEGQTFTIEPILTLGSTESITWPDNWTTLSADGSPAAQFEHTILITRTGAEILTIC* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1395 365 Hamap Methionine aminopeptidase [map]. 120 365 IPR002467 GO:0006508|GO:0070006
Lja2g1395 365 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 283 301 IPR002467 GO:0006508|GO:0070006
Lja2g1395 365 PANTHER METHIONINE AMINOPEPTIDASE 26 364 - -
Lja2g1395 365 SUPERFAMILY Creatinase/aminopeptidase 81 364 IPR036005 -
Lja2g1395 365 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 122 363 IPR002467 GO:0006508|GO:0070006
Lja2g1395 365 MobiDBLite consensus disorder prediction 15 46 - -
Lja2g1395 365 PRINTS Methionine aminopeptidase-1 signature 207 223 IPR001714 -
Lja2g1395 365 PRINTS Methionine aminopeptidase-1 signature 277 289 IPR001714 -
Lja2g1395 365 PRINTS Methionine aminopeptidase-1 signature 307 319 IPR001714 -
Lja2g1395 365 PRINTS Methionine aminopeptidase-1 signature 185 198 IPR001714 -
Lja2g1395 365 Pfam Metallopeptidase family M24 130 355 IPR000994 -
Lja2g1395 365 Gene3D Creatinase/methionine aminopeptidase superfamily 86 364 IPR036005 -
Lja2g1395 365 CDD MetAP1 128 363 IPR002467 GO:0006508|GO:0070006
Lja2g1395 365 PANTHER METHIONINE AMINOPEPTIDASE 26 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1395 Lja-Chr2 13389441 13403145 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1395 2 13389441 13403145 Lja2g1395 2 13389441 13403145 ECH