Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1393 ATGTCTTTCCCCCTCTTCCTCTTCTTCTCAATCATCACTCTTTCCACAGCTCTTCCTCCTCAACCATACTCTTACCCACACGGTCTCTCTTACCACATCGACTGTGGAAGCCCAACAAACACCACCGACTCCTTCAACACCACATGGCTCTCCGACCGCTACTTCACCGGCGGCGCCACCGGCATCGTCTCCGAGCCTCTCCACTTCCACCACAACCACGAGAAGACTCTCCGCTTCTTCCCAATCTCCTCCGGCAAGAAGAATTGCTACGCCATCCCCTCCCTCCCTCCCTCCCGCTACCTCTTCCGCACCTTCATCGTCTACGACAACTACGACGGCAAGTCTCACCCTCCCTCCTTCGACGTCTCCGTCCGCGGCACCGTCGTCTTCTCCTGGCGCTCCCCTTGGCCACAGTCGCTCTCCCGTAACGGCGCATACTCCGACCTCTTCGCGGTTGTTGAAGGCCAAGCCCTAATCTGCTTCTACAGCTTCGCCACCGATCCTCCGGTTGTGTCTTCTCTCGAGCTCTTCGCCGTCGATCCGTTGTCGTATGACTCCGCTGCGATCGGAAGCAACGAAACCATACTCGTGAACTATGGAAGGTTGAGCTGCGGCTCGGAGCAGTGGGGGCCGGGGTTCACCGCTGACGCCGACCGATTCGGCCGGTCGTGGCAGTCCGATAAGGAGTTCCGAACCGGGAAGGACAGGGTTGTGACGGTGTCGACGAGGGAGAGCATTGCTGGGACTGATCAGAAGCCGAATTACTTCCCGGAGAAATTGTACAAGACGGCGTTGACGACGGCGGAGACTGCGGAGGAAGGTGGTGGTGTTTTGGAGTATGAACTGGGTGTCGATGCGAAGCTGGATTATCTGGTGTGGCTGCATTTTGCTGAGATTGAAGGGAAGGTGAAGAGGGCAGGGGAGAGGGTGTTTGATGTGTTCATCAATGGCGATAACTTGACTAGGGTGGATATATACAAGCAGGTTGGGGGGTTTGCGGCGTTTAGCTGGCATCGGACGGTGAAGAATTTGAGTAGCAGTGTGATGAGTGTGAAGCTTGTTGGGGTTGTGGGTGCGCCTCTCATTTCTGGGATCGAGAATTATGCTCTGGTTCCTGGTGATCCTTCCACTGTTCCTCAACAAGTGATTGCCATGAAAGGGTTGAAAGATTCACTCCGGGTTCCTGAAAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGAATGAGTAAAGATAATACTGCTCTGGTGATTAGTCAAATAGATCTGGGCAGTCAAGGCTTGAAAGGTCTCATAAGCGATCAGATTAGTCTTTTGTCAGACTTGGTAAGCCTGAACTTGAGTTCTAATTTGCTGGTGGGTGAAATACCTTCTGGACTAGGTCAAAAATCCCTGACACACCTGGACTTGTCCAACAATCAATTAACAGGCTCCATACCAGATAGTATAGCCTCTTCAAGTTTGCAGCTTGCGCTATTGAATGGTAACTTATTGGAAGGACGAGTGCCAGAGCAACTTTATTCGATCGGTGTGCATGGTGGTGCTATTGATCTCTCTGGAAACAAAGGTTTGTGCGGTGTGCCATCCCTGCCAGCTTGTCCTATGTTTTGGGAGAATGGCAAATTATCTACTGGGGGTAAAATTGCAATAGGCGTGTCATGTCTTCTTGTTTTCTGTGTCATACTGCTGCTGGTTTATATCTATATCAGAAGGAGAAACAATGATTATGACTTCGCTCTGCCTCATGAATTAACATCATTAGCTGCCAAGAGAAACCGATATCAGAGGCAGAAATCCTTAATGGTTCTTGAAATGGAGAGTCAACACGCCAAGGGACTACCTTCACATTTTACCACCCAGTAA 1896 0.5116 MSFPLFLFFSIITLSTALPPQPYSYPHGLSYHIDCGSPTNTTDSFNTTWLSDRYFTGGATGIVSEPLHFHHNHEKTLRFFPISSGKKNCYAIPSLPPSRYLFRTFIVYDNYDGKSHPPSFDVSVRGTVVFSWRSPWPQSLSRNGAYSDLFAVVEGQALICFYSFATDPPVVSSLELFAVDPLSYDSAAIGSNETILVNYGRLSCGSEQWGPGFTADADRFGRSWQSDKEFRTGKDRVVTVSTRESIAGTDQKPNYFPEKLYKTALTTAETAEEGGGVLEYELGVDAKLDYLVWLHFAEIEGKVKRAGERVFDVFINGDNLTRVDIYKQVGGFAAFSWHRTVKNLSSSVMSVKLVGVVGAPLISGIENYALVPGDPSTVPQQVIAMKGLKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRMSKDNTALVISQIDLGSQGLKGLISDQISLLSDLVSLNLSSNLLVGEIPSGLGQKSLTHLDLSNNQLTGSIPDSIASSSLQLALLNGNLLEGRVPEQLYSIGVHGGAIDLSGNKGLCGVPSLPACPMFWENGKLSTGGKIAIGVSCLLVFCVILLLVYIYIRRRNNDYDFALPHELTSLAAKRNRYQRQKSLMVLEMESQHAKGLPSHFTTQ* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1393 631 Pfam Malectin-like domain 33 369 IPR024788 -
Lja2g1393 631 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 22 631 - -
Lja2g1393 631 SUPERFAMILY L domain-like 378 539 - -
Lja2g1393 631 Gene3D - 200 369 - -
Lja2g1393 631 Gene3D Ribonuclease Inhibitor 383 546 IPR032675 -
Lja2g1393 631 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 22 631 - -
Lja2g1393 631 ProSiteProfiles Leucine-rich repeat profile. 475 497 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1393 Lja-Chr2 13337979 13346005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1393 9 606 Receptor kinase-like Gene Family AT2G14440 27.663 7.60e-39 151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1393 2 13337979 13346005 Lja2g1393 2 13337979 13346005 ECH