Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1391 ATGCCACCGACACTCACACAGATCCTCCTCGCGCTCTTCTTCGCCGCCGCGGCTGCTGCCGCGGCGGCGACCTCCGTCGAGATCCCAGCGTTCCGGGAGGCGCCAGCATTCCGCAACGGAAGAGAATGCCCGAGGACTACAGCGGACATCAAACAAGCTCACGACCCCTCCCTCATCCACATCGCCATGACTCTAGACGCCACCTACCTCCGCGGCTCGGTCGCCGGCGTCTTCTCCGTCCTCCAGCACGCGTCGTGTCCGGAGAACGTCGTCTTCCACTTCGTCGCAACATCAAACCGCCGCCACGAGCTCCGGCGAGTCATCGCGTCCACGTTCCCGTACCTGAACTTCCGCATCTACCATTTCGACTCGAATCTCGTCCGCGGCAAGATCTCGTTCTCCATCCGCCGCGCGCTCGACCAGCCGCTGAACTACGCGCGGATGTACCTGGCAGACCTCGTTCCAGCGACGGTGAGGCGGATCATCTACTTCGACTCCGATCTGATCGTCGTCGATGACGTGGCGAAGCTATGGAGCATCGATCTAGGCTCGCGCGTGCTCGGCGCGCCGGAGTATTGCCACGCGAACTTCACCAACTACTTCACGCACCGGTTCTGGTCAAATCCTTCGTACTCAGCGTCGTTTAAGGATCGCGGCGCGTGTTACTTCAACACCGGAGTGATGGTTATAGATCTGTGGAAGTGGCGTGAGGGACGGTACACGCAGAAGCTGGAAAACTGGATGCGGATCCAGAAGCGGAGCCGGATCTACGAGCTAGGGTCTTTGCCTCCGTTTTTGCTGGTGTTCGCCGGCGAGGTGGTTAGTGTGGAGCACCGGTGGAACCAGCATGGGCTCGGCGGTGATAATCTGGAGGGTTTGTGCCGGGATCTGCATCCTGGTCCGGTGAGTCTTCTGCATTGGAGTGGGAAGGGGAAGCCGTGGCTGAGAATCGATTCGAAGAAGCCGTGTCCGTTGGATAGTTTGTGGGCCCCGTATGATCTCTTCCGCCATGCTCCGTCGTTGTTTAGCGATACGTGA 1038 0.6002 MPPTLTQILLALFFAAAAAAAAATSVEIPAFREAPAFRNGRECPRTTADIKQAHDPSLIHIAMTLDATYLRGSVAGVFSVLQHASCPENVVFHFVATSNRRHELRRVIASTFPYLNFRIYHFDSNLVRGKISFSIRRALDQPLNYARMYLADLVPATVRRIIYFDSDLIVVDDVAKLWSIDLGSRVLGAPEYCHANFTNYFTHRFWSNPSYSASFKDRGACYFNTGVMVIDLWKWREGRYTQKLENWMRIQKRSRIYELGSLPPFLLVFAGEVVSVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHAPSLFSDT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1391 345 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 344 - -
Lja2g1391 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 59 337 IPR029044 -
Lja2g1391 345 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 3-RELATED 10 344 - -
Lja2g1391 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 60 326 IPR029044 -
Lja2g1391 345 Pfam Glycosyl transferase family 8 60 317 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1391 Lja-Chr2 13311021 13313034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1391 19 345 Glycosyltransferase AT1G13250 77.134 0.0 509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1391 2 13311021 13313034 Lja2g1391 2 13311021 13313034 ECH