Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1388 ATGGTGTCAACGGCAGCCACTCCTCCAGCAACCGCAGGCCGAATACTGATCATCGGAGCAACCGGTTTCATGGGTCAGTTCATGACCAAGGCAAGTCTTGGCCTTGGACGCTCCACCTATCTGCTTCTAAGGCCAGGGTCTCTCACTCCCTCCAAGGCTGCCATTGTCAAAAGCTTTCAAGACAGGGGTGCTAAAGTCATTCATGGTGTTATAAACGACAAGGAATTGATGGTGAAGATTTTGAAAGACTACGAGATAGACGTTGTCATTTCACTCGTAGGTGGAGGAAATCTCATGGATCAGCGTACACTTGTGGACGCCATTAAGTCTGTCAAGACGGTCAAGAGGTTTTTGCCTTCAGAGTTTGGGCATGATACAGACAGGGCTAATCCTGTGGAGCCAGGTCTAACAATGTACAAAGAGAAACGGTTGATTAGGCGATTGATTGAGGAATCTGGGATTCCCTACACCTACATTTGTTGCAACTCCATTGCTTCTTGGCCATACCATGACAATTGCCACCCATCCAAGGTTCCCCCACCTCTGGACCAGTTTCTTATCTATGGTGATGGCTCTGTCAAAGCATACTTTGTGGATGGCAATGATATTGGAAAGTTCACAATGAAAGCCATTGATGATATCAGAACAAGGAACAAAAATGTTCATTTTCGACCCCCAAGCAACTGTTACAGCATCAATGAGCTTGCTTCTTTATGGGAAAAGATTATTGGTCGCAAAATCCCCAGAGCCATCGTTTCAGCTGAAGATCTTCTTGCTGCAGCTGCAGAAAATTGTATCCCTCGAAGCATTGTAGCTGCGTTCACGCATGATATTTTCATCAATGGTTGCCAAATTAACTTCAGCATAGAGGGGCCTAATGACATTGAGATTGGGACTCTGTATCCTGATGAAAAATTTCGATGCTTGGAAGAATGCTTCAAGGACTTTGTCCCCATGACCCATGACATGAATGTTCATGTTGGAACAACTGAAATTAACAACAACAGGAAGTCTTTGGTAGAGGTAGCGCCAATCACTGCTATGGGCTGA 1050 0.4524 MVSTAATPPATAGRILIIGATGFMGQFMTKASLGLGRSTYLLLRPGSLTPSKAAIVKSFQDRGAKVIHGVINDKELMVKILKDYEIDVVISLVGGGNLMDQRTLVDAIKSVKTVKRFLPSEFGHDTDRANPVEPGLTMYKEKRLIRRLIEESGIPYTYICCNSIASWPYHDNCHPSKVPPPLDQFLIYGDGSVKAYFVDGNDIGKFTMKAIDDIRTRNKNVHFRPPSNCYSINELASLWEKIIGRKIPRAIVSAEDLLAAAAENCIPRSIVAAFTHDIFINGCQINFSIEGPNDIEIGTLYPDEKFRCLEECFKDFVPMTHDMNVHVGTTEINNNRKSLVEVAPITAMG* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1388 349 Pfam NmrA-like family 15 247 IPR008030 -
Lja2g1388 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 260 IPR036291 -
Lja2g1388 349 CDD PCBER_SDR_a 14 282 IPR045312 GO:0016491
Lja2g1388 349 PANTHER PINORESINOL REDUCTASE-RELATED 10 325 - -
Lja2g1388 349 Gene3D - 14 303 - -
Lja2g1388 349 Gene3D - 163 313 - -
Lja2g1388 349 PANTHER LEUCANTHOCYANIDIN REDUCTASE 10 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1388 Lja-Chr2 13266613 13271415 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1388 2 13266613 13271415 Lja2g1388 2 13266613 13271415 ECH