Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1386 ATGGCGTCACACCCCTCTCTCACTCTCCTCATTCTCATCTTCTTCTTCAACTTCCGCAGCTCCACAGAGGAATACCTCAAGCTCCCATTAGTAAAGAGAAACCCACTATCTTCACCATCTCACCTTCTCGCCGCCGACATCCAACGCCTCAACACCCACCACCACCACCACCCCAGCAACATCAAGTCCCCCCTCGTCTCCGGCGCCTTCACCGGCGCCGGCCAGTACTTCGCCGACCTCCGAATCGGCTCCCCACCGCAACGCCTCCTCCTCGTCGCCGACACCGGCAGCGACATCGTCTGGGTCAAATGCTCCGCCTGCAGAAACTGCTCCAACCACCCACCCGGATCCGCATTCCTCGCCCGCCACTCCAAAACCTTCTCCAACCACCACTGCTCCGCCACCTCCTGCCGCCTCCTCCCTCACCCGAAAACCGCCCCGCCCTGCAACAACCACACCCGCTCCTGCCACTACGAATACTCCTACGCCGACGGTTCCCTAACCGCCGGTCTCTTCTCAAAGGAAACGACGACGTTCAACACGAGCTCCGGCAAGGAAGTGAAATTGAAGAATCTGAACTTCGGGTGCGGGTTTCGGATCTCCGGCCCGAGCGGTAACGGCGGCACCGTCGTGGACTCCGGCACCACGCTGACTTTCTTAGCTGAGCCAGCTTACCGGCAGATCCTGGCCGCGTTTCGGCGGCGCGTGAGGCTTCCGGCGGTGGAGGATCCTTCCCTGGCGTTCGACCTCTGCGTGAATGTCTCCGGCGTGGCTAGGGTGAAGTTCCCGAAGCTGAGGATTGGTCTTGCCGGGAAATCGGTGTTGTCGCCGCCGGCGAGGAACTATTTCATTGAGGTGGCGGATCGGGTCAAGTGTTTGGCGATCCAACCCGCGAAACCGGGTTCCGGGTTTTCGGTTATAGGGAATCTTATGCAACAAGGTTACTTGTTTCAATTTGAAGTGGACAGGTCTCGGGTCGGATTCTCGCGACGCGGGTGTGCGGTTCGTTGA 1011 0.5984 MASHPSLTLLILIFFFNFRSSTEEYLKLPLVKRNPLSSPSHLLAADIQRLNTHHHHHPSNIKSPLVSGAFTGAGQYFADLRIGSPPQRLLLVADTGSDIVWVKCSACRNCSNHPPGSAFLARHSKTFSNHHCSATSCRLLPHPKTAPPCNNHTRSCHYEYSYADGSLTAGLFSKETTTFNTSSGKEVKLKNLNFGCGFRISGPSGNGGTVVDSGTTLTFLAEPAYRQILAAFRRRVRLPAVEDPSLAFDLCVNVSGVARVKFPKLRIGLAGKSVLSPPARNYFIEVADRVKCLAIQPAKPGSGFSVIGNLMQQGYLFQFEVDRSRVGFSRRGCAVR* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1386 336 SUPERFAMILY Acid proteases 70 333 IPR021109 -
Lja2g1386 336 PANTHER OS07G0603500 PROTEIN-RELATED 204 335 - -
Lja2g1386 336 PANTHER BNAA02G27600D PROTEIN 20 203 - -
Lja2g1386 336 Pfam Xylanase inhibitor C-terminal 203 329 IPR032799 -
Lja2g1386 336 Gene3D Acid Proteases 182 335 IPR021109 -
Lja2g1386 336 ProSiteProfiles Peptidase family A1 domain profile. 76 336 IPR033121 -
Lja2g1386 336 Pfam Xylanase inhibitor N-terminal 76 199 IPR032861 -
Lja2g1386 336 PANTHER BNAA02G27600D PROTEIN 204 335 - -
Lja2g1386 336 Gene3D Acid Proteases 69 181 IPR021109 -
Lja2g1386 336 PANTHER OS07G0603500 PROTEIN-RELATED 20 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1386 Lja-Chr2 13245467 13246783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1386 66 198 Miscellaneous Gene Families AT1G77480 32.836 1.06e-13 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1386 2 13245467 13246783 Lja2g1386 2 13245467 13246783 ECH