Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1383 ATGATAGTTAGGTTAGGACTCATTGTTGCTGCTTCAATCGCAGCTTTTACAGTTAAGCAGCTCAATGTAAAAAGCCCAAATTCAGAAAATGATGAAGCAAGGTCTAGAAAGCATCAAGATGAGGAGGGCACAGAAGAAGAGCAGTTCAAAAGCTTTACTGATGCTATCAATGAAGAGGATAGCGAGGAGGAAGAGGAGAAAGAGGAGGTGAAGTTAATTAGCAGCATAATTAACCGGGCTAACGATTTTGAAGATGATATTCTGCCTGAATTTGAAGACCTTCTATCAGGAGAGATTGATTTTCCATTTCCTACTGCTGAGAAGGATGAGAAGGACATGGTTTATGAAACTGAGATGGCAAACAATGCCAATGAACTAGGACGATTGCGACAGCTAGTGCAGGAATTGGAGGAGAGGGAAGTGAAACTTGAAGGGGAATTGCTTGAGTACTATGGTTTGAAGGAGCAGGAATCGGACATTGTAGAGTTACAAAGGCAGCTCAAGATCAAAACGGTTGAAATTGATATGCTTAATATTACCATTAATTCGTTGCAGGCAGAGAGGAAGAAGCTTCAAGAAGAGCTCACACATGGAGGTTCAGCAAAGAAAGAACTTGAGGTGGCTAGAAACAAGATCAAGGAGCTACAAAGGCAAATACAGCTTGAGTCTAACCAAACGAAAGGCCAGTTGTTGTTGCTTAAACAACAAGTGTCTACTCTTCTGGTGAAGGAAGAAGAGGCTGCCAGAAAAGATGCTGAAATTGGAAGGAAATTGAAAGCTGTTAATGACTTAGAAGTTGAAGTTGTGGAGCTTAAGAGGAAAAACAAAGAACTTCAATTTGAGAAGCGAGAGTTAACAGTTAAACTCAATTCTGCTGAATCTACAGCAGCAGAACTCTCCAATATGACAGAGACTGAAATGGTTGCCAAGGCAAAAGAAGAGGTCAGTAACCTGAGGCATGCTAATGAAGACCTGCAAAAGCAAGTGGAAGGACTTCAGATGAATAGGTTCAGTGAAGTTGAAGAGCTTGTATACCTTCGTTGGGTCAATGCATGCTTGAGGTTTGAGCTAAAGAATCAACAGGCACCATCAGGAAAATTTTCAGCCCGTGACCTCAGCAATAATCTTAGCCCAAAATCACAAGAGAAGGCTAAGCAGCTAATGTTAGAATATGCTGGATCAGAACGTGGGCAGGGCGACACAGATCTTGAGAGTAACTACTCCCATCCTTCTTCACCAGGAAGTGAAGATTTTGACAACGTTTCTATGGATAGCTCTATGAGCAAATATAGTACCATTAGCAAGAAAACTAGCCTAATCCAAAAGTTCAAGAAGTGGGGCAAAAGCAAAGATGATTCTAGTGCTCTTTCATCACCAGCAAGATCTTTTTCAGGAAGTTCTCCAAGAAGGATGAGTGTGAGTGTTAAACCTAGGGGTCCACTGGAAAGCTTGATGATAAGGAATGCCGGTGATGGTGTAGCCATCACTACCTTTGGGCAGAGGGATCAGGAAACCACTGATTCTCCTGAAATTCCAACTACTCCTAACTTAAGAAGAGCTCCATCCAGTGATTCCTTAACTACTGTTTCTTCCTCATTCCATTTGATGTCTAAGTCAATTGATGGGTCTCTAGATGAAAAATATCCTGCATATAAGGATCGCCATAAATTGGCCTTGTCAAGGGAGAAACAACTTAAAGAAAAGGCTGAGAAAGCAAGAGTGCAGAAATTTGGTGACAGTTCAAATTTGAGTATATCGAAGGCTGAAAGAGATAGACCTATTTCTTTGCCACCAAAACTCACTCTTATAAAGGAGAAGCCATTGGTTTCTGCTAGTGCAAATGATCAATCTGATGATGGAAAGAATGTTGATACTCAAAACATTAGCAAGATGAAGCTTGCCGACATTGAGAAAAGGCCTACTAGGGTGCCTAGGCCACCTCCTAAACCTTCTAGTGGTGGTGCTGCTAGCACAAACTCAAATCCTTCCAATGGAGCAGCATCTGGTCCATCCATTCCCCCTCCCCCTCCTCCTCCAGGTGCTCCACCGCCACCACCAGGTGGACCACCACGCCCACCTCCTCCCCCAGGAAGCCTAGCAAGAGGGGGGATGGCTGGTGACAAAGTTCACCGAGCTCCAGAGCTAGTTGAATTTTATCAATCATTGATGAAACGGGAAGCAAAGAAGGATACTTCCACATTACTAATTTCTTCAACAAGTAATGCATCTGATGCCAGGAGCAACATGATTGGGGAAATTGAGAATAGATCAACATTCCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGACTTCGTTACGTCCTTGGCAACTGAAGTTCGAGCAGCCACCTTCTCAAATATTGATGACCTGGTGGCTTTTGTGAATTGGCTAGATGAGGAACTTTCCTTCCTGGTCGATGAACGCGCTGTCCTCAAGCACTTTGATTGGCCTGAAGGTAAAGCAGATGCATTAAGGGAGGCAGCTTTTGAATATCAGGATCTGATGAAATTGGAGAAGCGAGTCTCCACCTTCGCTGATGATCCCAAACTCTCATGTGATGCTGCTCTAAAGAAGATGTATTCACTCCTTGAAAAAGTGGAGCAAAGTGTATATGCACTCTTGCGAACAAGAGATTTGGCTATTTCACGGTACAAGGAATTTGGAATCCCAGTAAACTGGTTACTGGATTCAGGAGTTGTAGGCAAGATCAAGCTTTCTTCTGTACAACTAGCAAAGAAGTATATGAAACGTGTTACCTCTGAACTTGATGCTTTATCTGGATCTGAGAAGGAACCAGCTAGAGAGTTTTTGACTCTGCAAGGAGTACGTTTTGCTTTCCGCGTCCATCAGTTTGCAGGAGGCTTTGATGCAGATAGCATGAAAGCTTTTGAAGACCTAAGGAACCGCATCCAAACCCCTCAAGCTGGTGAAGATAATAAACCAGAAACAGCTGGTGAAGATAATGAATCAGAAACATAG 2985 0.4291 MIVRLGLIVAASIAAFTVKQLNVKSPNSENDEARSRKHQDEEGTEEEQFKSFTDAINEEDSEEEEEKEEVKLISSIINRANDFEDDILPEFEDLLSGEIDFPFPTAEKDEKDMVYETEMANNANELGRLRQLVQELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELTHGGSAKKELEVARNKIKELQRQIQLESNQTKGQLLLLKQQVSTLLVKEEEAARKDAEIGRKLKAVNDLEVEVVELKRKNKELQFEKRELTVKLNSAESTAAELSNMTETEMVAKAKEEVSNLRHANEDLQKQVEGLQMNRFSEVEELVYLRWVNACLRFELKNQQAPSGKFSARDLSNNLSPKSQEKAKQLMLEYAGSERGQGDTDLESNYSHPSSPGSEDFDNVSMDSSMSKYSTISKKTSLIQKFKKWGKSKDDSSALSSPARSFSGSSPRRMSVSVKPRGPLESLMIRNAGDGVAITTFGQRDQETTDSPEIPTTPNLRRAPSSDSLTTVSSSFHLMSKSIDGSLDEKYPAYKDRHKLALSREKQLKEKAEKARVQKFGDSSNLSISKAERDRPISLPPKLTLIKEKPLVSASANDQSDDGKNVDTQNISKMKLADIEKRPTRVPRPPPKPSSGGAASTNSNPSNGAASGPSIPPPPPPPGAPPPPPGGPPRPPPPPGSLARGGMAGDKVHRAPELVEFYQSLMKREAKKDTSTLLISSTSNASDARSNMIGEIENRSTFLLAVKADVETQGDFVTSLATEVRAATFSNIDDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLEKRVSTFADDPKLSCDAALKKMYSLLEKVEQSVYALLRTRDLAISRYKEFGIPVNWLLDSGVVGKIKLSSVQLAKKYMKRVTSELDALSGSEKEPAREFLTLQGVRFAFRVHQFAGGFDADSMKAFEDLRNRIQTPQAGEDNKPETAGEDNESET* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1383 994 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 982 IPR040265 -
Lja2g1383 994 Coils Coil 552 572 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 24 67 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 364 382 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 449 475 - -
Lja2g1383 994 Coils Coil 119 149 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 29 56 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 668 699 - -
Lja2g1383 994 Coils Coil 153 194 - -
Lja2g1383 994 Coils Coil 198 225 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 498 525 - -
Lja2g1383 994 Coils Coil 308 335 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 610 629 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 364 424 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 399 424 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 968 994 - -
Lja2g1383 994 Coils Coil 254 302 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 652 667 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 607 707 - -
Lja2g1383 994 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 982 - -
Lja2g1383 994 MobiDBLite consensus disorder prediction 452 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1383 Lja-Chr2 13223761 13229703 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1383 2 13223761 13229703 Lja2g1383 2 13223761 13229703 ECH