Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1379 ATGGCCAATCTCTCTCCCACACTCCCATCAGTACCTCTCCTCTTCTTTGCAAGAATTTCAGGGCTCACAGTAGCACTGCTTGTACTCTTCTGGGCTCTTGCCTTCAAATCCAGCTTCCTCACTCACTCCCTTTCCCAACAAGACCTCATCTATGCAATTCTTCATCCTCTTTTGATGGTCATTGGATTTATCATCTTAAGTGGAGAAGCAATCTTGGTGCATAGATGGTTACCTGGGTCTAGGAGCTTGAAGAAATCAGTGCACTTGTGTCTTCAAGGGGTGGCTTTGACTTCTGGGATCTTTGGGATTTGGACTAAATTTCAGGGACAGAATGGGATTGTGGCTAATTTCTATAGCCTACATTCATGGATGGGTTTGCTTTGTGTATCCCTCTTTGGAGCTCAGTGGTTGATGGGGTTCTTGAATTTTTGGCACCGGGGAGAGGCGCGTTCAGCGAGGATAAGGATCTTACCTTGGCATATCTTCCTGGGACTATACACTTATGGATTGGCAATAGCAACTGCTGAAACTGGATTGCTGGAGAAATTGACATTATTACAAACAAAGAGAAATGTACCTAAACACAGCACTGAGTCCATTGTTGTTAATAGCTTAGGTTTGGGTCTTGCCCTCCTAAGTTGCTTTGTTATTTTGGCTGCTGTTTCACCTAAGTATCAATCATCTCTTCAAAGCAAACTTTTGTACTTAGACACGAGGTGTTTGTCATCTTAA 732 0.4344 MANLSPTLPSVPLLFFARISGLTVALLVLFWALAFKSSFLTHSLSQQDLIYAILHPLLMVIGFIILSGEAILVHRWLPGSRSLKKSVHLCLQGVALTSGIFGIWTKFQGQNGIVANFYSLHSWMGLLCVSLFGAQWLMGFLNFWHRGEARSARIRILPWHIFLGLYTYGLAIATAETGLLEKLTLLQTKRNVPKHSTESIVVNSLGLGLALLSCFVILAAVSPKYQSSLQSKLLYLDTRCLSS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1379 243 Gene3D - 5 230 - -
Lja2g1379 243 ProSiteProfiles Cytochrome b561 domain profile. 16 221 IPR006593 -
Lja2g1379 243 Pfam Eukaryotic cytochrome b561 54 184 IPR006593 -
Lja2g1379 243 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 8 243 - -
Lja2g1379 243 SMART 561_7 54 179 IPR006593 -
Lja2g1379 243 PANTHER CYTOCHROME B561-RELATED 8 243 IPR043205 GO:0016491
Lja2g1379 243 CDD Cyt_b561_ACYB-1_like 54 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1379 Lja-Chr2 13195714 13198138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1379 1 243 Chloroplast and Mitochondria Gene Families AT1G26100 64.372 6.19e-101 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1379 2 13195714 13198138 Lja2g1379 2 13195714 13198138 ECH