Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1375 ATGTTCACGCCGCAAAGGAAGGCGTTTCCAACGCCGCACCGAGTCGGGGCCGGGAAGACTTCCGGCCTCACTCCCTCCGCGAAGGGTAAAGCCGTCGCCGTCTCCACTGAAGCGCTGCCTCCGCCGCCGCTGGGTTCTCTGAGCGAAGCCTCTGGCGAGGTGGCGATGGGCTTCGACGCAGGGAACTTGGATGACTGGATGAAGTTTAGGGAGGCTGGGTTACTGGATGAGGCGGAAATGCAGAGGAAGGACCAAGAAGCACTCTATGAGAAGGTCTCGAGGCTCGAAAGAGAGCTCTTTGACTACCAATACAACATGGGCCTCCTCTTGATTGAGAAGAAAGAATGGAGTTCAAAGTTTGATGAACTGAGGCAAGCACTAGATGAAACTGAGGAAATTCTAAAACGAGAACGGTCTGCACATTTAATAGCATACTCTGAAGCTGAGAAGCGAGCGGAAAATTTGAGGATAGCATTGAGCACAGAAAAGCAGTGTGGAGAAGATCTTGAGAGAGCTTTGCGTGAAATGCAAAAAGCACATGCCCAAGTCCAGTCTTCCTCCCATTCAAAGCTAGCTGAAGCAAATGCATTGGTGGATGGAATTGAAGAGAAGTCTTCAGTGGTTAACAAGAACTTGCATGATGCAGAAGCTAAGCTTGCTGAGGTGAACAGAAAAAACTCAGAGCTTGATATGAAATTGCGAGAGTTGGAAGTTCGTGAAAGTTTGCTTCAAAAGGAGCGCCTGTCTTTAGCTACTGATAGAGAATCATTTGAGGCCACTTTCTACAAACAAAGGGAAGATTTGAAGGAGTGGGAGAGGAAGCTACGGCAAAGAGAGGATATTGTATGTGATGGTAGACAAAATTTTGTTGGGAGAGAAATGAAGGCAATTGAAACTGAGAAGAACTTGAAGCAGAAAGAGAGAGACCTAGAAGTGCTGGAGAAGAAAATTGATTCATCTAATTCTTTGTTAAAAGTAAAGGAAGCTGAGATAAGTAAAAGGGTAGCCGATTTAGATGTGCAAGAGAAGGAAGTGAATTCTTTAAAGAGCACGCTGGAGATGAAAGAGAAAGCATTACTTGCAATGGAATTGAAACTTAGTGCTAGGGAAAGAGAGGGGATCCAGAAACTCCTTGCTGAGCAAAAGGATAATCTGGATTTAAAGTTGCAGGAGTTTGATCTTGAAATGGAACAAAAGCGGAAATCCCTTATTGAAGAGTTTAGTAGCAAAGAGGAAGCCTTGGAGCAGAGGGAAGTTGAAGTCAACCATAGAGAAAATAAGGTCGGAAAAGAAGAGCAGGCTTTGAGTAAGAAGGCTGAGAGAATAAAGGAGCAAAATAAGGAACTTGAAGCAAGGTTGACATCTTTGAAGGAGAAAGAGAAGACTATCAAAATCAAAGAAAAAGAGCTGGAGAAGGAAAAACAACAATTGCTTGCTGATCGGGAGAGTCTGGAGAATTTAAATGTTGAACTTGGGAAGATAAAAGCTGAGATTTCTCAGCAGGAGCTGCAAATATGTCAAGAGACAGAGAATTTGAAGCTTACTGAAGAAGAGAGGTCAGAGCATTCTCGTCTGCAATTGGAACTACAACAGGAGATAGAGCATACAAGATTGCAGAAGGATTTTCTTATGAAGGAAGCTGAAAACTTGAGGGAGGAGAGACAGAGGTTTGAAAAAGAATGGGATGCACTGGATGAGAAAAAAGCTGAAGTTAGTAAAGAACACAATGAAGTTAATGAGGAGAAAGAAAGATTGGGAAAACTGCAGAACAGTGAAGAAGAAAGGTTGAAAAGAGAGAAACAAGATATTCAAGATCATATAGAGAAAGAGCTTGAGAAGCTTGAACTGGAGAAGGAATCATTTAGAGATTCAATGAAGCAAGAAGAACTTCTTTTATCAGAAAAGGTGAAAAATGAAAAGGCACAAATGCTTGAAAATATTGAAAGAAAGACAAGGAATCTCAAGAATGAAATCCAGAAGAGGCAAGAGGAAATGGAGAAAGACCTGCAGGAAAGAGAGAAAAAATTTCAGGAGGAGATGGAAAGAGAGATTAATAATATTAATGTCTTGAAGGGTGATGCTGAGAAGGAATGGGAAGAAGTGAAGTCTGAGGGGATCAGGTTAGAGAATGAGAGAAAGGAACTTGAGTCTAACAAGCAGCAGCTGAAATCAGGCCAACGTGAGATACATGAAGATTCAAAAATGCTTATGAATCTCAGCCGGAAGGTTAAGAAGGAACGTGAATGCCTTATGGCTGAAAGAAACAATTTTCTGGCACTTGTTGAGAAGCTAAGGAGTTGCAATGCCTGTGGAGAAGTTATTGGGGACTTTGTTATATCTGATATTCAGTTACCTGACTGTAAGGAAAGATGTGTTATGCCCTTACCTACTTCCCCTGTTCTGAATGATAGGCCTCTTAAGAACACAGAGGACAACGTTGGTGCTTCTGACTATTCTGGATCTGTGAGACCTGTGTCTTGGATCCGCAAATGCACATCCAAGATTTTTAAATCCCCAAGCAAAAGAACAGATGCTGTTAGTGCTTCAGACATGGCTGGGACATCGCCACTGCCAGATCTGAATGCTAATACAGAAGGAGCTAGAGTTATTCTTCAAGAACGACAACTAACAAGGGAAATGGTTCATCTCTCTTCAGAGACACCACTCGTCCAATCCGATAACATCGTTAGAGAGGTGGATAATGAGTCCCAATCCATAGATCACAGCTATGTGGATAGTTTGGTAGATGGAGGTCCAGATGATTCTCAGCAGTCAGTTCCAAAGCTTGGTCGGCGCAGAGCTGGGAGGAAAAGCAAATCTGGAATTGTTAGAACACGCTCAGTAAAGGCTGTTGTTAAAGAGGCCAATGAGTTCCTAGGAAAAGCTTCAGGGGAAATTGAAAATGCAAGTCTGCAATCTCTCGATGCTGATCATGTCAAAGACAGTCAGGAAGACTCCAGTCACACTGAGAAAGCCATTGGTAACACTGGAAGGAAGCGGCAGAGGGCTCAAACTTCTAGGATAGCAGAAAGTGAGCAGAATGCAGGTGATAGTGATGGACAATCAGATAGTATTACAACTGTTGGCCGCAGGAAGAAGAGGCAAACGGTTGCTCAACCTGCACATGTTACCGGAGAGAAGCGATACAATCTTAGGCGGCACAAGACTACAGGTGAGGTTTCATCAACAAAGGCCGCATCCAAGGGAGGAAAGAGCGTGGGGAAAGAATCTATTGGTGGTAAACCGAAGGTGGATAATCAAAGTCGTGAAGTGGTCATAGAAACTTCATCTGGAGTAGCTGATGACAATGTCCAAGGCACATCTCTGCTGCAGGTCTCGACAGCGAAGACTGTGGAGTTCTCTGATGATAGAGTTGTTAGGTTTCAATTGCCAAGAGACGTTATTGGTGATGATGGTGCTGAAACCACCTCTGTGGATCCAGTGGAAGAAAATGCCAGGGCGGAACATGGAGATGAAGATGGAAGCAGATTCCATGAGATTGAAAATGATAATGAGGGGGAAGAGGAGGTGGAAGCGGAAGAGGGCGAGGAAGATGAAGAGGAAGAGGATGATGAAGATGAGGATCCTGGTGAGGTGTCTATTGGCAAGAAGATTTATAAATTTTTTACAACATAA 3636 0.4348 MFTPQRKAFPTPHRVGAGKTSGLTPSAKGKAVAVSTEALPPPPLGSLSEASGEVAMGFDAGNLDDWMKFREAGLLDEAEMQRKDQEALYEKVSRLERELFDYQYNMGLLLIEKKEWSSKFDELRQALDETEEILKRERSAHLIAYSEAEKRAENLRIALSTEKQCGEDLERALREMQKAHAQVQSSSHSKLAEANALVDGIEEKSSVVNKNLHDAEAKLAEVNRKNSELDMKLRELEVRESLLQKERLSLATDRESFEATFYKQREDLKEWERKLRQREDIVCDGRQNFVGREMKAIETEKNLKQKERDLEVLEKKIDSSNSLLKVKEAEISKRVADLDVQEKEVNSLKSTLEMKEKALLAMELKLSAREREGIQKLLAEQKDNLDLKLQEFDLEMEQKRKSLIEEFSSKEEALEQREVEVNHRENKVGKEEQALSKKAERIKEQNKELEARLTSLKEKEKTIKIKEKELEKEKQQLLADRESLENLNVELGKIKAEISQQELQICQETENLKLTEEERSEHSRLQLELQQEIEHTRLQKDFLMKEAENLREERQRFEKEWDALDEKKAEVSKEHNEVNEEKERLGKLQNSEEERLKREKQDIQDHIEKELEKLELEKESFRDSMKQEELLLSEKVKNEKAQMLENIERKTRNLKNEIQKRQEEMEKDLQEREKKFQEEMEREINNINVLKGDAEKEWEEVKSEGIRLENERKELESNKQQLKSGQREIHEDSKMLMNLSRKVKKERECLMAERNNFLALVEKLRSCNACGEVIGDFVISDIQLPDCKERCVMPLPTSPVLNDRPLKNTEDNVGASDYSGSVRPVSWIRKCTSKIFKSPSKRTDAVSASDMAGTSPLPDLNANTEGARVILQERQLTREMVHLSSETPLVQSDNIVREVDNESQSIDHSYVDSLVDGGPDDSQQSVPKLGRRRAGRKSKSGIVRTRSVKAVVKEANEFLGKASGEIENASLQSLDADHVKDSQEDSSHTEKAIGNTGRKRQRAQTSRIAESEQNAGDSDGQSDSITTVGRRKKRQTVAQPAHVTGEKRYNLRRHKTTGEVSSTKAASKGGKSVGKESIGGKPKVDNQSREVVIETSSGVADDNVQGTSLLQVSTAKTVEFSDDRVVRFQLPRDVIGDDGAETTSVDPVEENARAEHGDEDGSRFHEIENDNEGEEEVEAEEGEEDEEEEDDEDEDPGEVSIGKKIYKFFTT* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1375 1211 MobiDBLite consensus disorder prediction 977 1089 - -
Lja2g1375 1211 Coils Coil 113 140 - -
Lja2g1375 1211 MobiDBLite consensus disorder prediction 1148 1170 - -
Lja2g1375 1211 Coils Coil 296 330 - -
Lja2g1375 1211 MobiDBLite consensus disorder prediction 1 48 - -
Lja2g1375 1211 Coils Coil 205 246 - -
Lja2g1375 1211 Coils Coil 382 402 - -
Lja2g1375 1211 PANTHER PROTEIN CROWDED NUCLEI 4 1 1211 IPR040418 GO:0005634|GO:0006997
Lja2g1375 1211 Coils Coil 338 358 - -
Lja2g1375 1211 MobiDBLite consensus disorder prediction 571 601 - -
Lja2g1375 1211 MobiDBLite consensus disorder prediction 977 997 - -
Lja2g1375 1211 PANTHER PROTEIN CROWDED NUCLEI 3 1 1211 - -
Lja2g1375 1211 Coils Coil 428 504 - -
Lja2g1375 1211 MobiDBLite consensus disorder prediction 910 943 - -
Lja2g1375 1211 MobiDBLite consensus disorder prediction 1171 1196 - -
Lja2g1375 1211 Coils Coil 633 728 - -
Lja2g1375 1211 Coils Coil 75 98 - -
Lja2g1375 1211 Coils Coil 533 631 - -
Lja2g1375 1211 MobiDBLite consensus disorder prediction 1134 1211 - -
Lja2g1375 1211 MobiDBLite consensus disorder prediction 998 1025 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1375 Lja-Chr2 13166589 13174380 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1375 2 13166589 13174380 Lja2g1375 2 13166589 13174380 ECH