Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1370 ATGAAGAGCTTCAAGGCTTTCAGTCATGCAATCATTGCTCTTTTCATAATCTGTCTAAGAGCAAGGAGCTATGGACAAACAGAACTTGATGTAGCTCCAATGGAGAAAAAAGAGAAGGATGCTCTATACTCCACCATTCAAGGCTTTGTTGGTGATTGGTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTCAGGGGCTCTCTTGTGATTTGTTCAATGGGTTTTGGTATGTCACTGCCATGAAAGTTGGACCTATTGACGACAATTCTCTAAGATGTGCCAAAATTGTACAATTTAGACCACAGTTGTTTGAGCTCAAACACCTAAAAGCTCTATCCTTCATCAAATGCTTTGAATCACAGCACAGGAATCCAGTTACCATCCCCAATGGAAACTGGGAAAAACTTGCAGGCACCTTAGAATCACTTGAGTTCAGATCAAACAATGGTCTAACTGGAAAAATCCCTTCAAGTTTTGGTTTATTACTAGAAAATGGCTTAACAGGTGAAATTCCACCAGAAATTGGCAACCTCAGTAACTTGAAGAGGCTTGTTCTTGCTGGCAACTATTTCACTGGGAAGATTCCAGATATTTTTAGTGCACTAAATCAGTTATTAATCCTTGATTTGAGTAGAAATTCATTGTCTGGGACTTTGCCTCTGACACTTGGAAGCTTGACTTCCCTTTTGAAGCTTGATGTGAGCCATAACCATTTGGAGGGGAGTTTGTTGAAGGAATTTGCTTATCTTAAGAATCTAACCCTTATGGATCTAAGGAACAACACTTTCTCGGGTGGATTGACCTTGAGTTTTCAAGAGATGCATTCTTTAGAAGAAATGGTTCTGTCCAACAATCCAATAGGTGGAAACATCAGGACCTTAAAGTGGAAAAATCTTCAGAACTTGGTAATTTTGGATCTCTCTAACATGGGATTGACAGGGGAAATTCCTGAGTCTCTATCAGAATTGAAGAGGTTGAGATTTTTGGGGCTCAGTGACAACAACCTCACAGGAAACCTTTCACCAAAACTATCATCTCTTCCTTGTCTCAGTGCACTCTATGTTAGTGGAAACAATTTAACTGGAGAGCTTAAATTCTCTACAGAGTTTTATGGAAAAATGGGAAGGCGTTTTGGGGCTTGGAGCAACCCTAGCCTTTGCTACCAAGTTGGAGTAATGTCAACAAGCCATGTTCCTTATGAATCTAGCACAAAAAATGGGGATGTGAACATGACATTCCATTCCATAGCATCTTTGGCATTTTTGAGCTATGTCCCCAATGGCTTCTGGTGGACTTTTCTGCAAGAAATGTTGGTGATGGGTTTGTTCTTAAATTCTTACACAGGTCTTTAA 1368 0.402 MKSFKAFSHAIIALFIICLRARSYGQTELDVAPMEKKEKDALYSTIQGFVGDWWNGSDLYPDPCGWTPIQGLSCDLFNGFWYVTAMKVGPIDDNSLRCAKIVQFRPQLFELKHLKALSFIKCFESQHRNPVTIPNGNWEKLAGTLESLEFRSNNGLTGKIPSSFGLLLENGLTGEIPPEIGNLSNLKRLVLAGNYFTGKIPDIFSALNQLLILDLSRNSLSGTLPLTLGSLTSLLKLDVSHNHLEGSLLKEFAYLKNLTLMDLRNNTFSGGLTLSFQEMHSLEEMVLSNNPIGGNIRTLKWKNLQNLVILDLSNMGLTGEIPESLSELKRLRFLGLSDNNLTGNLSPKLSSLPCLSALYVSGNNLTGELKFSTEFYGKMGRRFGAWSNPSLCYQVGVMSTSHVPYESSTKNGDVNMTFHSIASLAFLSYVPNGFWWTFLQEMLVMGLFLNSYTGL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1370 455 Pfam Leucine rich repeat 184 244 IPR001611 GO:0005515
Lja2g1370 455 PRINTS Leucine-rich repeat signature 210 223 - -
Lja2g1370 455 PRINTS Leucine-rich repeat signature 231 244 - -
Lja2g1370 455 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 415 - -
Lja2g1370 455 Gene3D Ribonuclease Inhibitor 91 396 IPR032675 -
Lja2g1370 455 SUPERFAMILY L domain-like 44 369 - -
Lja2g1370 455 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 4 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1370 Lja-Chr2 13126675 13133778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1370 152 392 Receptor kinase-like Gene Family AT5G51350 27.536 8.38e-20 90.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1370 2 13126675 13133778 Lja2g1370 2 13126675 13133778 ECH