Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1365 ATGACGGACAACACTGACGACATTGCAGAGGATATCTCGTTCCAGAGCTTCGACGATGACTGCAAATTGCTTGGCAATCTTCTCAACGACGTTCTGCAGCGTGAGGTTGGCACCCACTTCGTTGAACAGCTCGAAAAGATTCGAGTCCTTGCACAGAGTGCATGTAATGTGAGACAGGCAGGGATTGATGATATGGCAGAGCTGTTAGAGAAGCAGTTGGCTTCAGAGTTATCCAAGATGACATTGGATGAAGCTCTGATGATTGCTCGCGCCTTCAGCCATTATCTTACTTTGATGGGTATAGCTGAAACCCACCATAGGGTTCGTAAAGGAGGAAATGTGTCAATTTTCGCAAAATCTTGTGACGATACCTTTAACCTGCTGGTGCAAGGTGGAGTTTCCCCAGATGATCTTTATAACACAGTTTGCAAGCAGGAGGTTGAAATTGTTCTTACAGCTCATCCCACACAAATTAATCGGCGTACCTTGCAATTCAAACACATTAAAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTCACCCATGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGCCAGAAACCTACACCAGTTGATGAAGCTAGAGCTGGGTTGAATATTGTGGAGCAGTCACTCTGGAAAGCTGTTCCTCGTTATTTACGTCGGGTCAGCAATGCTTTAAAGAAGCACACGGGAAAACCACTTCCATTGACTTCCACTCCCATAAAGTTTGGATCTTGGATGGGAGGTGATCGAGATGGAAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTTCACTTTTATCAAGATGGATGGCAATTGATCTCTATGTTCGGGAAGTGGATAGCCTGAGATTTGAACTATCCATGAACCGGTGTTCTGATGAGTTGTCTAGACTGGCACATGAAATTCTAGAAGAAGCTAATAATGAGAACCAATGCGAGCATTGGAATCAATCTGCGAGTAGAAGTCAATTGAAAAATCAAAATCCTTCACTTCCAACTAAACTTCCATCTAGAGCTCATTTACCCTCTTTTGCTGAAAATGGTCAGTCTGAGCATCCCAGACTCGACATTCCGGGATCTGATCACAATAAACTCAATCACAAGGATGGTAAGTTTTCACGTTCAACTAAGAGCGATGGTGGAAGTTGCAAAATTCATTCATCGCTAGCAAGTCCAGCTAATTCCAATGCTTCTTCACCACCTTCAATTTCACGCTCTCCTTCTCAACAACTTCTTGCTCAGAGGAAATTGTATGCGGAATCCCAGATAGGAAGATCAAGTTTTCAGAAGCTTTTGGAGCCAAAGCTCCCTCAGCGTCCGGGAATTGCTCCTTACAGAGTTGTCCTTGGGAATGTAAAAGATAAGCTTCTGAGAACTCGTAGATTATTGGAGATTCGTCTAGAGGAAGGTCCATGCGAACACAATCCTTCTGATTACTTTGAAACTAAAGATCAGCTTTTGGAACCTCTGCTCCTCTGTTATGAATCTCTGCAATCATGTGGATCCGGGGTGCTAGCTGATGGTCGACTTGCTGATCTGATTAGAAGAGTTGCTATCTTTGGCATGGTGTTAATGAAGCTTGACTTGCGTCAGGAATCTACCAGACATGCTGAAACACTGGATGCAATTACAAGGTATTTGGATATCGGAACATACAGTGAATGGGATGAAGAAAAGAAACTGGACTTCTTAACTAAAGAACTGAAAGGGAAGAGGCCACTGGTTCCATATGGTATAGAGGTTTCTCCAGATGTTAAAGAAGTCTTGGACACATTCCAAATTGCTGCTGAGCTTGGAAGTGATTCACTTGGAGCCTATGTTATCTCCATGGCCTCAGATGCAAGTGATGTCCTTGCAGTAGAGCTTTTACAGAAGGATGCACGGCTTGCTGTTAGTGGGGAGTTAGGAAGAGCATGTCCTGGTGGAACGCTACGGGTGGTTCCTCTATTTGAAACTGTCAAGGACCTAAGAGCTGCTGGTTCAGTTATTAGAAAGCTGTTATCAATTGATTGGTATCGCCAACACATCATTAAAAACCACAATGGGACTCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCTGGGCGCTTTACTGCTGCTTGGGAACTTTACAAAGCTCAAGAGGATGTTGTGGCTGCTTGCAATGAGTACGGTATTAAGATTACCCTGTTCCACGGCCGTGGAGGGAGTATTGGTCGCGGTGGTGGCCCAACGTATCTAGCTATTCAGTCCCAACCACCTGGCTCTGTCATGGGAACTCTTCGGTCAACTGAGCAGGGGGAGATGATACAGGCCAAGTTTGGGTTGCCACAGACTGCTGTAAGACAGCTTGAAATATACACAACAGCTGTGCTACTTGCAACCCTTCGTCCACCGCTCCCACCCCGGGAAGAAAAATGGCGCAATGTCATGGAAGATATTTCACAAGTCAGTTGCCAGTGTTACCGCAGTGTAGTCTATGAAAATCTAGAATTCTTGTCCTACTTCCATGAAGCTACTCCTCAAGCAGAGCTTGGCTTCCTCAACATTGGTAGCCGCCCCACAAGAAGAAAGAGCTCATCAGGAATTGGACACCTTCGTGCCATACCATGGATATTTGCATGGACCCAAACCAGATTTGTTCTTCCATCCTGGCTTGGAATTGGAGCAGGTTTGAAAAGTGCCTGTGAGAAAGGACAAACAGAAGAGCTCAGAGCCATGTACAAAGAATGGCCTTTCTTTCAAAGCACAATAGACCTGATTGAGATGGTTCTGGGAAAAGCAGATAGTCCCATTGCTAAGCACTATGATGATGTTCTCGTGTCAGAGGAGAGAAAGGAACTCGGTCGTCAACTACGGAGCGAGCTTGAAACAACTGGGAAGTTTGTACTTGTTGTTTGTGGGCAGGAGAAACTTCTGCAGAATAATAGGACCTTAAGGAGGTTGATTGAGAATAGACTTCCTTTCCTCAATCCCATGAACATTTTGCAGGTGGAGATACTTAAGAGGTTAAGATGTGATGATGACAACCATAAAGCCAGAGATGCTTTGCTCATCACAATTAATGGTATTGCAGCTGGAATGAAGAACACAGGTTAA 3147 0.4436 MTDNTDDIAEDISFQSFDDDCKLLGNLLNDVLQREVGTHFVEQLEKIRVLAQSACNVRQAGIDDMAELLEKQLASELSKMTLDEALMIARAFSHYLTLMGIAETHHRVRKGGNVSIFAKSCDDTFNLLVQGGVSPDDLYNTVCKQEVEIVLTAHPTQINRRTLQFKHIKIAHLLDYNDRPDLTHEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPRYLRRVSNALKKHTGKPLPLTSTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYVREVDSLRFELSMNRCSDELSRLAHEILEEANNENQCEHWNQSASRSQLKNQNPSLPTKLPSRAHLPSFAENGQSEHPRLDIPGSDHNKLNHKDGKFSRSTKSDGGSCKIHSSLASPANSNASSPPSISRSPSQQLLAQRKLYAESQIGRSSFQKLLEPKLPQRPGIAPYRVVLGNVKDKLLRTRRLLEIRLEEGPCEHNPSDYFETKDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVAIFGMVLMKLDLRQESTRHAETLDAITRYLDIGTYSEWDEEKKLDFLTKELKGKRPLVPYGIEVSPDVKEVLDTFQIAAELGSDSLGAYVISMASDASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRAAGSVIRKLLSIDWYRQHIIKNHNGTQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEYGIKITLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMIQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNVMEDISQVSCQCYRSVVYENLEFLSYFHEATPQAELGFLNIGSRPTRRKSSSGIGHLRAIPWIFAWTQTRFVLPSWLGIGAGLKSACEKGQTEELRAMYKEWPFFQSTIDLIEMVLGKADSPIAKHYDDVLVSEERKELGRQLRSELETTGKFVLVVCGQEKLLQNNRTLRRLIENRLPFLNPMNILQVEILKRLRCDDDNHKARDALLITINGIAAGMKNTG* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1365 1048 MobiDBLite consensus disorder prediction 333 354 - -
Lja2g1365 1048 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 8 1048 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lja2g1365 1048 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 8 1048 - -
Lja2g1365 1048 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1048 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lja2g1365 1048 MobiDBLite consensus disorder prediction 396 431 - -
Lja2g1365 1048 Pfam Phosphoenolpyruvate carboxylase 19 333 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lja2g1365 1048 Pfam Phosphoenolpyruvate carboxylase 453 1048 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lja2g1365 1048 Gene3D Phosphoenolpyruvate/pyruvate domain 416 542 - -
Lja2g1365 1048 Gene3D Phosphoenolpyruvate/pyruvate domain 289 367 - -
Lja2g1365 1048 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 706 718 IPR033129 -
Lja2g1365 1048 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 1048 IPR015813 GO:0003824
Lja2g1365 1048 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lja2g1365 1048 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lja2g1365 1048 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lja2g1365 1048 MobiDBLite consensus disorder prediction 375 395 - -
Lja2g1365 1048 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Lja2g1365 1048 MobiDBLite consensus disorder prediction 333 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1365 Lja-Chr2 13085272 13095698 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1365 2 13085272 13095698 Lja2g1365 2 13085272 13095698 ECH