Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1364 ATGCCCCCGGAGCAAGAAACCACAACCATTCCGGCTACCCCAAGCCGCCAGGAGCACAACTCCTTCCATGCACAACCACCAAGTCCTTCCACTAACAACACTTTGGATAACCACATTCACTCTCAGTACCACCCACCACTACCACCACCAAGACTTTCCATTCTTCACCGCTCCCTCCGTCCCGTTACCCTTAAATTTGAAGATGTGAGTTACAGCATAACCATTGGAAACCAGAAGAACAATGGTGGTGCTCACGTGTCATCGTCACGTGACCCAAAACTAACACGAACGGTGCTAAACGGTGTGACTGGGATTGTGGGCCCAGGAGAGATCATGGCAATGCTGGGTCCCTCCGGTAGCGGCAAAACCACCTTGCTCACCGCCCTCGCCGGCCGACTCACCGGTAAACTCTCCGGCGACATCACATACAACAACCAACCTTTCTCCGGCACCGTCAGACGCAGCACCGGGTTCGTCTCCCAAGACGACGTGCTGTACCCTCACCTCACCGTGGTTGAAACACTCACCTACGCCGCTCTGCTGAGACTTCCCCGGAGCCTCACCGTGGAAGAGAAAATGGAGCAGGTGGAGCTGATCATCACGGAGCTGGGGCTCTCGAGGTGCCGGAACAGCCCCGTCGGCGGCGGCGGCGCGTTGTTCCGGGGAATCTCCGGCGGGGAGCGGAAGCGGGTTAGTATCGGGCAGGAGATGTTGGTCAACCCGAGTTTGTTGTTGCTGGATGAGCCGACGTCGGGCTTGGACGCCACCACGGCACAGCGCATCGTGGCGGTGCTTCGGAGCCTCGCTCGCGGTGGCCGGACCGTGGTGACCACCATTCACCAACCATCTAGCCGGCTGTATAGGATGTTTGATAAGGTGGTGGTGCTGTCTGATGGATATCCAATTTATAGCGGGCAAGCGGGTCGGGTCATGGATTATCTTGAATCGGTTGGGTTTGTACCCGCTTTCAATTTTGTGAATCCTGCTGATTTCCTCATTGACCTTGCAAATGGCATTGTTGCTGATATGAAACCGAATGATAAGATAACTCACCATGAGGGTCAAGCTTCGATCAAACAATCCCTAGTTTCATCTTACAAAAAGGATTTGTACCCTCTCCTCAAAGAAGAGATTCAGCAGAGTAATAGAGACCAAACATTTTTCACTACAAGAAAATATAGAAGTTCTAACAACCAATGGACAGCTAGCTGGTGGGAGCAATTCAAGGTTCTGCTTAAGAGGGGTTTAAAAGAGAGGAGGCATGAATCTTATTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCTGGACTTCTCTGGTGGCATTCTGATCCCTCACATGTACAAGATCAGGTAGGCCTGCTTTTCTTCTTCTCTATCTTCTGGGGATTCTTCCCTCTGTTCAGTTCCATCTTTGCATTTCCAATGGATAGTCCAATGCTCAAGAAAGAACAATCATCAGGCATGTACCACCTCTCCTCCTACTACATTTCCAGAATGGTTGGGGACTTACCAATGGAGCTTGTGCTTCCAACAATCTTTGTAACCATCACCTACTGGATGAGTGGTCTAAAGCCATCAATGGTTACATTCATGTTAACCCTCTTGATCATGCTTCTGAATGTGCTAGTCTCACAAGGAATAGGCCTGGCACTTGGAGCTATTCTGATGAATGTCAAACAGGCCGCAGCTCTGGCTTCGGTGACAATGCTGGTGTTTCTTCTAGCTGGCGGCTACTACATTCAACAAACACCATCTTTCATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTATTGTTATAAGCTTCTGGTGGGAGTGCAATTCTCAGCGAATGAGGTTTATAAGTGTGGACCAAGTTTGCATTGTGAGATAAGAGATTTTCCTGCCATAAAGTGTCTCCAGCTTGGTAACATGTGGGATGATGTGGCTGTGTTGGCTATAATGTTGATTGGGTACAGAGTAGTGGCTTATTTAGCTTTGAGGATGGGTCTGCATCATTGA 2013 0.4958 MPPEQETTTIPATPSRQEHNSFHAQPPSPSTNNTLDNHIHSQYHPPLPPPRLSILHRSLRPVTLKFEDVSYSITIGNQKNNGGAHVSSSRDPKLTRTVLNGVTGIVGPGEIMAMLGPSGSGKTTLLTALAGRLTGKLSGDITYNNQPFSGTVRRSTGFVSQDDVLYPHLTVVETLTYAALLRLPRSLTVEEKMEQVELIITELGLSRCRNSPVGGGGALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDATTAQRIVAVLRSLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGQAGRVMDYLESVGFVPAFNFVNPADFLIDLANGIVADMKPNDKITHHEGQASIKQSLVSSYKKDLYPLLKEEIQQSNRDQTFFTTRKYRSSNNQWTASWWEQFKVLLKRGLKERRHESYSGLRIFQVLSVSILSGLLWWHSDPSHVQDQVGLLFFFSIFWGFFPLFSSIFAFPMDSPMLKKEQSSGMYHLSSYYISRMVGDLPMELVLPTIFVTITYWMSGLKPSMVTFMLTLLIMLLNVLVSQGIGLALGAILMNVKQAAALASVTMLVFLLAGGYYIQQTPSFIAWLKYISFSHYCYKLLVGVQFSANEVYKCGPSLHCEIRDFPAIKCLQLGNMWDDVAVLAIMLIGYRVVAYLALRMGLHH* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1364 670 MobiDBLite consensus disorder prediction 1 51 - -
Lja2g1364 670 Pfam ABC-2 type transporter 280 343 IPR043926 GO:0140359
Lja2g1364 670 MobiDBLite consensus disorder prediction 8 40 - -
Lja2g1364 670 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 42 667 - -
Lja2g1364 670 Pfam ABC-2 type transporter 406 612 IPR013525 GO:0016020|GO:0140359
Lja2g1364 670 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524
Lja2g1364 670 SMART AAA_5 108 301 IPR003593 -
Lja2g1364 670 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 316 IPR027417 -
Lja2g1364 670 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 64 323 IPR003439 GO:0005524
Lja2g1364 670 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Lja2g1364 670 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 42 667 - -
Lja2g1364 670 Gene3D - 84 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1364 Lja-Chr2 13050159 13057618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1364 98 299 Calmodulin-binding Proteins AT2G36910 30.476 2.27e-12 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1364 2 13050159 13057618 Lja2g1364 2 13050159 13057618 ECH