Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1360 ATGGTGAAGTTCTCAAAGCAGTTTGAGGGGCAACTCATTCCAGAATGGAAAGAGGCCTTTGTAGATTACTGGCAACTCAAGAAGGACCTCAAAAAATTCCAACCTTTCAACATTACCAACAACACACCCAACAAGCACCAAAGTAGTTCTGTACCTAAGTACATAATTTCATCAATAAGAAACTACTCTTTATTTGGTCATCCACATGGGGAGCATGGACCAATTCAAGTCCATAGGAAACTTGCTTCATCATCTTGTGTGGGGGACATGTATGAGACAGAACTACTAGAGCAGTTTGCTGACACTGAGGCAGCTAAAGAATTTTTTGCATGTCTGGACCAGCAACTAAACAAGGTGAATAATTTCTATAGAACAAAGGAGAAAGAGTTCATGGAGAGAGGGGATTCCCTGAAAAAACAAATGGACATTCTCCTTAAGCTCAAATCTACATTCAAGGAGCAGCAGAGCAAAGGAGGCTCTTCCCATGGCTCCAAGGAGGACCAATCTATTTCTTGCACATTCTCCAATGAGGAAGACTCTGTTAGGAACAGAGCACAGCAAGAAGAAATGCAGGACATGAGCACAGATGATTTGGAGAAAACTGAAGTGCCATTTTCAGATGAAATTGGGAAATCTATGGAGATGAAAAGAGAAGATGGGAAATTGAGATCACTTTCTGGCCGTACTATCAATTGCCAAGGGAAGAATCTGAGGATAAACATTCCCTTGACAACACCATCTCGAACCTTCTCAGCCATAAGTTACCTTCTTAGAGAAGATTTGCTCAATCAATCATCAAGGAAATGTGGTGGAGAAGTATGCAAGATTCATCTTAACAAAACAAAGCTGCATCATGCTGAAAAGATGATCAAAGGGGGTTTCATTGAACTATACAAAGGACTAGGGTATCTCAAAGTTTACAGGAACTTGAATATGCTTGCATTTATAAAGATCCTGAAGAAATTTGACAAGGTCTCTGAGAAAGAAATTCTTCCCATCTATCTCAAAGTTGTTGAGAGTTCCTATTTCAATAGCTCAGACAAGGTGATGAAGTTAGCAGACGAAGTTGAGGAACTATTCATCATAAATTTTGCTGAAGATAATCGAAGAAAGGCCATGAAATACCTTAGGCCAAGCCAGCGTGAAGAATCACATACAGTAACTTTCTTCATTGGACTATTTACCGGATGCTTCGTGGCGCTTTTCGCGGGATATGTTATAATGGCTCACATAACCGGCCTGTATGGACGACAACCAAATTCAGTTTACATGGAAACTGTCTACCCTGTGCTTAGCATGTTCAGCCTTGTGTTTCTACATTTCTTTCTCTATGGTTGCAATATTCTTGCATGGAGAAAGACTCGTATAAACTACAACTTCATTTTTGAACTGGCCCCTACTAAGGATCTTAAGTACAGAGATATATTCTTAATTTGTACAATGGCGATGACTGTTGTGGTTGGGGTAATGTTTCTTCATTTGACTCTACTGACGAAAGGGTATCCTTATGACCAAATTCATGACATTCCTGGATATCTTCTTCTGGTCTTCTTACTAATATTGGTGTGCCCTTTCAACATTTTATACCGGTCAAGCCGATATCGTTTCCTTTGTGTGATAAGGAACATAATTTGGTCACCCCTTTACAAGGTTGTCATGCTAGACTTTTTCATGGCTGATCAACTTTGTAGTCAGGTGCCAATGCTAAGGAACCTAGAATATGTAGCATGCTATTATATAACTGGGAGCTACAAAACTCAGGACTATGGTTACTGCATGAGGACAAAGCACTACAGAGATCTAGCTTATGCAGTGTCATTTCTACCTTACTATTGGAGGGCTATGCAGTGTGCTAGAAGATGGTTTGATGAAGGGGAAACAAGCCACCTTGTGAATCTGGGAAAATATGTATCAGCAATGTTAGCAGCAGGTGCTAAAGTGGCTTATGAGAAAGATCCTAGTATTGGATGGCTTTGTCTTGTTGTGATCATGTCTAGTGGAGCAACTGTGTACCAATTGTACTGGGACTTTGTAAAAGACTGGGGTTTGCTTCAAGTGAATTCCAAGAACCCATGGCTCAGGAATGAATTAATGCTTCGCAGAAAAGGCATTTACTACTTCTCAATGGGATTGAATTTTATTCTGAGGCTTGCTTGGTTACAAACTGTCCTCCATTCAAGATTTGAACATGTTGATTATCGAGTAACGAGCATATTTTTAGCAGCTCTTGAAGTTACCAGAAGAGGGCTGTGGAATTTCTTCAGATTGGAGAATGAGCATCTAAATAATGTTGGCAAGTTTAGAGCAGTGAAGATAGTACCACTTCCTTTTCATGAAGTGGATGAGGAAGACTAG 2355 0.4008 MVKFSKQFEGQLIPEWKEAFVDYWQLKKDLKKFQPFNITNNTPNKHQSSSVPKYIISSIRNYSLFGHPHGEHGPIQVHRKLASSSCVGDMYETELLEQFADTEAAKEFFACLDQQLNKVNNFYRTKEKEFMERGDSLKKQMDILLKLKSTFKEQQSKGGSSHGSKEDQSISCTFSNEEDSVRNRAQQEEMQDMSTDDLEKTEVPFSDEIGKSMEMKREDGKLRSLSGRTINCQGKNLRINIPLTTPSRTFSAISYLLREDLLNQSSRKCGGEVCKIHLNKTKLHHAEKMIKGGFIELYKGLGYLKVYRNLNMLAFIKILKKFDKVSEKEILPIYLKVVESSYFNSSDKVMKLADEVEELFIINFAEDNRRKAMKYLRPSQREESHTVTFFIGLFTGCFVALFAGYVIMAHITGLYGRQPNSVYMETVYPVLSMFSLVFLHFFLYGCNILAWRKTRINYNFIFELAPTKDLKYRDIFLICTMAMTVVVGVMFLHLTLLTKGYPYDQIHDIPGYLLLVFLLILVCPFNILYRSSRYRFLCVIRNIIWSPLYKVVMLDFFMADQLCSQVPMLRNLEYVACYYITGSYKTQDYGYCMRTKHYRDLAYAVSFLPYYWRAMQCARRWFDEGETSHLVNLGKYVSAMLAAGAKVAYEKDPSIGWLCLVVIMSSGATVYQLYWDFVKDWGLLQVNSKNPWLRNELMLRRKGIYYFSMGLNFILRLAWLQTVLHSRFEHVDYRVTSIFLAALEVTRRGLWNFFRLENEHLNNVGKFRAVKIVPLPFHEVDEED* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1360 784 ProSiteProfiles EXS domain profile. 593 784 IPR004342 GO:0016021
Lja2g1360 784 MobiDBLite consensus disorder prediction 181 202 - -
Lja2g1360 784 MobiDBLite consensus disorder prediction 153 202 - -
Lja2g1360 784 ProSiteProfiles SPX domain profile. 2 336 IPR004331 -
Lja2g1360 784 MobiDBLite consensus disorder prediction 153 180 - -
Lja2g1360 784 Pfam SPX domain 2 44 IPR004331 -
Lja2g1360 784 Pfam SPX domain 74 338 IPR004331 -
Lja2g1360 784 PANTHER PHOSPHATE TRANSPORTER PHO1 HOMOLOG 1 2 784 - -
Lja2g1360 784 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 2 784 - -
Lja2g1360 784 CDD SPX_PHO1_like 3 332 IPR034092 -
Lja2g1360 784 Pfam EXS family 428 761 IPR004342 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1360 Lja-Chr2 12985879 12991684 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1360 2 12985879 12991684 Lja2g1360 2 12985879 12991684 ECH