Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1357 ATGCACAACGCATATTTCAGCTCAGTGATATATACTGTTAGGTGTAAAGAATCATATTCTTTACCTTCCAATGCCTACTCAAACTTTTGGTGTGAAAGATTTGATAGAACCCCATCACACTGTTCATCTTGCTGTGGTTATTGTGATTGCTGTGCACTCTCCACTTACAGAGTACCCATAAAGCCTATTCTTCTCAATGGATTGAGGCAATCCGCTCTCCTTCAATTGTCAGCATCTAGAAGGTTGACTCTGGGTTGTGAAGACCAGTGCTTTTCCAGGACACCAGCTTACAGTCTTCTCAGAGGTTCTTTTGAGGTTAATTGTTCGGCCAACGAGAGAACTGTTTGCAATAGAAGTAGAAGGAGAATAAAGGGAAGATGTTATTGTGCAGCCTCACAAAAAGGGAGAGAAAATTTCCGTTCAGTTGGCTCTGATGACTGTGAATCAGTTCTCAGCATTTTGAGTGATGAAGCCGATAAAGTTGCTATTGATGTCAAATGGAAGAATGTGTCTTCATCCAAAAGAACGGAAGCTGATAAGAAAAGGAAAAATTTGAGTAGAGAGAAACATTTAAGTTTGGCTGAGAGAGTAGAAACAGAGAAAAATGGAAATTTGAAGCAGCATGAGACATCCGCCATAGACTTGAGAAGAGCGTATGAAAGGCCCAACAAAGACAGGGAAGCCTTTACAAAAAGTGAAAATCATAGGAAGCGAAGAGATGTGTCTAGTTGTTCATCTTATTACTCGCTTTCGTCCGGAGATTTTGAGAGTGACCTGGAAGCTCAGCAAAAGATTGATGTGGAAGAATTCTCACAGGGATATAAGAAGGATGAAGCAAATAATATGGAGGGAAAAGTAAATGAAGAATTCAATAGGAAAAGAGATGACTTGAAAAAGGTGCAGGGAATTTCAAAGAAGGAAAAAATTGCATTTGCTGCGGATATTGATTGGAACATGAGGAAGAAGTCTGAAAAGAAGCTGGAAGAGGGAACTATGCAAGAAAGAGAGTCCACGGGAGAAAACCAAGGTATGCATTCAAGAGTATTTACAACAGATGACTCCGGTTATGTAAACGCATCTACTTCACAAAAGCGAGTCAGTGATGAAGAAAATTCATCTTTTGTTGACTATTTGGATAAGAAAACAAACAAGGCATATATTCAAACAGGGAACAGAAGAACACAGCATTCTACAGATATTGAAGTGTCTGGTTGTGATGAAGTTGAGACAGCATTGTCATCACGAAGAACATCCAGTGGCAGGAAAGGGAATCTAGAAATATCAGAAACACTGTTAAAGGAAACAAGCGACGAACATAGAAAATTCATTGGCTCAACTTCCACCACAGGAAAGGAAACTTTGAAATCAAAGAAGACACATAGTGGCAGGGAGGAAAACCTTCAGATATCAGAAACGCACATACAGGAAACAAGTGGTGAACATGAAAAGTTTATTGGTTCTACTTCCACCACAGGAAAGAATGTAATAAATAGAAGTTCCCAGAAATATATTGGAAATTCAAATATTGAAGACAGTGAAAGGACCTCAAATATTAGGATGAAGAATGTGGGAGAGAAAAAAATTTCTTTGAGTTCTGTTCAGGGAGTGGAGGAGCAACACCAAAAAGGAGAGATGATCATCACACAGGCTGAAGAGAGAAGAAGAAAGTCTCAACAATTTTCTGAAGCATCACAAGCTCATGGGAATAATGTTGAAGACACATCTATTGCAAAGTCTAGAACTAGTCTAAAGAACTGGCAAGGAAATTTGTACTTCAGCTCAAATGCAAGGGCTACAGAGCTGCAAACTGATAAAAGGACAACTGAAAGTTCTGTACACAGCAAAGGATATGAACATGTCAGTACTTCATCAGAAGGCTATGCCAGTGATGAAAAGCAAGTTTCAAGCTCTCAAAGAAGTTCTGAGAAAGTTAGATTCATCCCAAAAAGCAAATTGACGACAGTTGTTAAAACTAGAGAAAGTTCTTCCCAAACTGATGAAAGGATTTTTGAATTGACCAGTGAGGAGCAAAGACGTTGGAACACCTCCAGAGAGGAATCAAGCTTCAAGGGATCATGGAATCGGGTTTCTGTGGCTGGGGAAAGTGTGATATCAGCAGAAGGTGATGAAAGAAGTTCTCCAATAACATTGATCCCTTCCTCTCCCCAGATGGGTGGAGGCTCAACTCATGTTGAATCCACCTCTGGAACAGCAAGCCCTCAGATCTTCCTTGAAACTTTAGAAAGTGGCTCGTTTGCTTTGTATGACAAGTCAGGAAAAAGCCCTGCTTTGCTTTCAGGACCATATTCTAGACATGAAAGTGATAAGGTGTATAGCAAGCCTTCTAATACCATGGCTCCAGAAGATGCTCTTGGTTCAGCTGGTCGTTTAGCGGAATCATCTAGTCAGTTTGTTGATGAGTTCGTAGAGAGGGTCAGGCATGATGTTACAACATCAGAAACACAGGAGATGGAAGTTACTGGGACAAATTTGGCCTTTGATGTTGAGGGTAATCGGGTCTATAGTTCAACGCAACAAGGCACTCCAATTTACCCTCAGTCAAAGAAGCATGATTCTAGCCGTTCCTCTGGGCTTCCTGGGATCAAAGGCCCTGCTGATGAAATGTGGGATGTAACAGAACCGTCTGTTGAGCAAGTTCCAGTAGTTGAAGAACCAGAGATCAACAAGGAAACTGCGAAACCGATTGTAAATAGAACTGGCAGGTCTCTGTGGAGTATAATTTCAGATGTTGTTCGATTACGTTGGGGTTCACGCCCTGGGTCCTCCACTTCAGCTGGAAGATCAGGTGAGAGAAACTCACCAAACAAATCTGATAGCGAGACATGGTTTTCTGGGCAGGAGCATGAGGAAACCAGTAAAAGTAATGTACTAAAAGAAACAAGTGTCTCACCCGAAACCATGAGTTCAGATAAGTTAATACCAGGTATTCGTCATCCCCAAACTGAGGGAGAGGTGTCTGACACACAAAAATTGAAGGAAAAAGTAAAACATCTTGAAGTTGGATCATCTTCTTCAAATAGGTTGGAAAGTGGATCAACATCCCTAGCCGCCTCATATGCTTCCGGAGAGGAAAATGCTATTTTGACTGAAGATGGAAAAGTTTTGAAAGAAAGTACTTCTGGCACAAAAAACATAGAATTACCAATTTCATTACCTGCCAGAGGGCAACCTATTGTAGGAGAAATTGTAAATATCAGTGGACCTGACATGTCTGGAATTGAACCAGTGGTAGAAATCAAGGATCCTGTTGCTCCAGTGCAGTCTGAATTGTCTGGCTCAGAGAGAAAGGACGGAGAGTTGAAGCAAAGGAAGTTTCAGCGGAACAAGCAAGTTGGAAGAGATAGGTTTGATGATTGGGAAGAAGCTTATAAAGTTGAACTGGAGCAGCGAAAAATGGATGAAATGTTCATGAATGAAGCACTTTTGGAAGCCAGGAAGGCTGCTGATGCTTGGGAGGTGCCTGTTGGTGCTGTTCTTGTGCAGGACGGAAAAATTATTGCACGAGGGTGCAACTTAGTAGAAGAGTCCCGGGACTCCACTGCCCATGCAGAGATGATTTGTATAAGAGAAGCTTCAAAACTGCTTCACACATGGAGACTATCAGAAACTACACTTTATGTTACACTTGAGCCCTGTCCAATGTGTGCTGGTGCCATTCTTCAGGCAAGAGTAGATACTGTTGTGTGGGGAGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCTGATGGAGGACAAAATGTCTCGGAACCAAGAGATATTCAACCTGCCCCAGTTCATCCATTCCATCCAAATATCAAAATAAGACGAGGGGTATTGGCAACTGAGTGTGCCAATGAAATGCAGCAATTCTTTCAGCTGAGAAGGAAAAAGAATAAAGAAGAGTCATCAAAGGAACACTCTCGCCTTGCTGTTACTCACCACCATCCCTCCAAGTTACTTAACAAGATACAGGACATGTTCCACGTAATGTTCTGTTTGTAA 4020 0.4154 MHNAYFSSVIYTVRCKESYSLPSNAYSNFWCERFDRTPSHCSSCCGYCDCCALSTYRVPIKPILLNGLRQSALLQLSASRRLTLGCEDQCFSRTPAYSLLRGSFEVNCSANERTVCNRSRRRIKGRCYCAASQKGRENFRSVGSDDCESVLSILSDEADKVAIDVKWKNVSSSKRTEADKKRKNLSREKHLSLAERVETEKNGNLKQHETSAIDLRRAYERPNKDREAFTKSENHRKRRDVSSCSSYYSLSSGDFESDLEAQQKIDVEEFSQGYKKDEANNMEGKVNEEFNRKRDDLKKVQGISKKEKIAFAADIDWNMRKKSEKKLEEGTMQERESTGENQGMHSRVFTTDDSGYVNASTSQKRVSDEENSSFVDYLDKKTNKAYIQTGNRRTQHSTDIEVSGCDEVETALSSRRTSSGRKGNLEISETLLKETSDEHRKFIGSTSTTGKETLKSKKTHSGREENLQISETHIQETSGEHEKFIGSTSTTGKNVINRSSQKYIGNSNIEDSERTSNIRMKNVGEKKISLSSVQGVEEQHQKGEMIITQAEERRRKSQQFSEASQAHGNNVEDTSIAKSRTSLKNWQGNLYFSSNARATELQTDKRTTESSVHSKGYEHVSTSSEGYASDEKQVSSSQRSSEKVRFIPKSKLTTVVKTRESSSQTDERIFELTSEEQRRWNTSREESSFKGSWNRVSVAGESVISAEGDERSSPITLIPSSPQMGGGSTHVESTSGTASPQIFLETLESGSFALYDKSGKSPALLSGPYSRHESDKVYSKPSNTMAPEDALGSAGRLAESSSQFVDEFVERVRHDVTTSETQEMEVTGTNLAFDVEGNRVYSSTQQGTPIYPQSKKHDSSRSSGLPGIKGPADEMWDVTEPSVEQVPVVEEPEINKETAKPIVNRTGRSLWSIISDVVRLRWGSRPGSSTSAGRSGERNSPNKSDSETWFSGQEHEETSKSNVLKETSVSPETMSSDKLIPGIRHPQTEGEVSDTQKLKEKVKHLEVGSSSSNRLESGSTSLAASYASGEENAILTEDGKVLKESTSGTKNIELPISLPARGQPIVGEIVNISGPDMSGIEPVVEIKDPVAPVQSELSGSERKDGELKQRKFQRNKQVGRDRFDDWEEAYKVELEQRKMDEMFMNEALLEARKAADAWEVPVGAVLVQDGKIIARGCNLVEESRDSTAHAEMICIREASKLLHTWRLSETTLYVTLEPCPMCAGAILQARVDTVVWGAPNKLLGADGSWIRLFPDGGQNVSEPRDIQPAPVHPFHPNIKIRRGVLATECANEMQQFFQLRRKKNKEESSKEHSRLAVTHHHPSKLLNKIQDMFHVMFCL* 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1357 1339 MobiDBLite consensus disorder prediction 843 878 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 224 242 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 561 576 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 923 997 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 763 798 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 714 737 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 474 493 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 1099 1114 - -
Lja2g1357 1339 Pfam MafB19-like deaminase 1141 1240 IPR028883 GO:0002100|GO:0008251
Lja2g1357 1339 MobiDBLite consensus disorder prediction 324 368 - -
Lja2g1357 1339 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1138 1260 IPR002125 -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 336 368 - -
Lja2g1357 1339 SUPERFAMILY Cytidine deaminase-like 1135 1305 IPR016193 GO:0003824
Lja2g1357 1339 MobiDBLite consensus disorder prediction 924 948 - -
Lja2g1357 1339 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 885 1329 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 614 642 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 843 861 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 704 737 - -
Lja2g1357 1339 Gene3D Cytidine Deaminase, domain 2 1128 1317 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 551 576 - -
Lja2g1357 1339 CDD nucleoside_deaminase 1144 1251 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 224 245 - -
Lja2g1357 1339 MobiDBLite consensus disorder prediction 600 642 - -
Lja2g1357 1339 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 885 1329 - -
Lja2g1357 1339 Hamap tRNA-specific adenosine deaminase [tadA]. 1144 1301 IPR028883 GO:0002100|GO:0008251
Lja2g1357 1339 MobiDBLite consensus disorder prediction 1091 1114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1357 Lja-Chr2 12972182 12980201 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1357 2 12972182 12980201 Lja2g1357 2 12972182 12980201 ECH