Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1356 ATGAGGGGTGAAAGGAGGAAGAGGCTGCATTTTAGTAAGATCTACTCATTTGCTTGTGGGAGAGCTTCATTCAAAGGAGATCATTCACAGATTGGAGGGCGTGGATATTCAAGGGTGGTGTTCTGCAATGAACCAGAGAACTTTGAAGTTGGGATTAAGAACTATGCAGATAATTCTGTGACTTCCACAAAATATAATATTGCTACTTTCTTGCCAAAATCACTGTTTGAGCAGTTTAGGAGGGTTGCTAACTTCTATTTCTTGGTGACTGGAATCTTGGCTTTCACAAAGCTTGCTCCTTATACTGCTGTCAGTGCTATCCTTCCTCTGATTATTATTATTGCTGCAACTATGGTCAAAGAGGGTATTGAAGATTGGCGCCGGAAAAAGCAGGATATGGAGGTGAACAATAGAAAAGTTAAAGTTCATAAAGGGCATGGAACTTTCGAATATACTGAATGGAAGAATCTGAAAGTGGGGCATATAGTAAAGATAATGAAGGACGAATTTTTCCCTGCAGACCTCCTTCTTCTTTCATCTAGCTATGAAGATTCAATTTCCTATGTTGAGACCATGAACTTGGATGGAGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAACTTCTGCCTTACATGAGGATTCCGAGTTTAGTGATTTCAAAGCTACAATCAAATGTGAAGACCCAAATGCAAATTTATATTCATTTGTTGGGACCCTGGAGTTTGAAGAGCAACAATATCCCCTCTCTCCTCAGCAGCTTCTTTTGAGAGACTCTAAACTCCGTAACACGGATTACATATTTGGAGCTGTCATCTTCACTGGTCACGATACAAAGGTTGTTCAAAATTCTACTAATCCCCCCTCAAAGAGAAGCAAAGTTGAGAAGAAGATGGATAGAATTATCTACTTCTTGTTTTGCATCTTATTTCTGATGGCATTTGTTGGATCTATTTTCTTCGGTGTTGCGACTAAAGATGATTTGGATGACGGGGTGATGAAAAGATGGTATTTAAGACCGGATGATTCGACAATTTTCTTTGATCCTAAAAGAGCAGTTGCTGCTTCTGTATATCATTTTCTTACAGCCTTAATGTTATATGGCTTCTTCATTCCCATCTCATTGTATGTTTCAGTAGAAATTGTCAAAGTTCTTCAAAGTATCTTCATCAACCAAGATATCCATATGTACTATGAAGAAGGAGACAAACCGGCCCATGCCCTCACCTCAAACTTAAACGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACATGCAACTCAATGGAGTTCATCAAATGTTCCATTGCTGGAGTAGCTTATGGCCGCGGTGTTACGGAGGTCGAGAGGGCCATGAGTAGAAGAATCGATTCTCCTTTGAATATTGACATCAGGGAATCTCCTGATAGAAGTGCACCCACCATCAAAGGTTTTAACTTTGCAGATGAAAGGATCATGAATGGAAACTGGGTTAGTGAGCCTTATGCAGATGTTATCCAGAATTTTTTTCGCTTATTGGCAATCTGTCATACAGCCATACCAGATGTGGATGAAGAAGACACGGGAAATGTCACATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCAAGAGAAATTGGTTTTGAATTCTATAAAAGAACTCAAACTAGTTTATCAATGTACGAATTGGATCCAGTTTCTGGTGAAAAAGTTGAAAGGACTTACAAACTTCTCCATGTACTAGAATTCAATAGCTCGAGGAAGCGAATGTCAGTGATAGTGAAGGATGAAGAAGGGAGAATTATGCTTCTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCACGGAACATGTAAATGAATATGCTGATGCAGGTTTAAGAACCCTGATACTGGCGTATCGTGAACTTGATGAAGAACTATACAATGAGTTTGATAGTAAGTTTTCTCAAGCCAAAAATTCAGTTACAGAAGATCGGGAAACACTGATTGAGGAAGCATCAGATAAGATTGAGAGGAATCTAATCCTTCTCGGTGCTACTGCTGTAGAGGACAAGCTTCAAAATGGGGTTCCTGAGTGCATTGACAAGCTTGCACAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATGTTGGGTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAACAGCTTATAATTCAATTGGAGACTCCAGAAATTCTAGCTTTAGAGAAGGCTGGAGACAAGTCGGCGATTGCCAAGGCTTCCAAGGAAAATATCCGCCAACAGATATCTGAAGCTATTCAACAGCTTGCTGCCTCCAGAGGAACCTCTCAAAGAGCATTTGCTTTAATTATTGATGGAAAATCACTTGCTTATGCTCTACATGATAGTATAAAGGACATGTTTCTAGAGCTCGCGATTAAGTGCGCATCTGTTATCTGCTGCCGCTCGTCTCCGAAGCAAAAAGCACTGGTCACTAGACTGGTTAAATCTGGAACTGGCAAAACGACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATCAGTGGTGTTGAAGGAATGCAGGCCGTTATGTCTAGTGATATTGCAATTGCACAGTTTCGTTATTTGGAAAGGTTACTTCTTGTACACGGACATTGGTGTTACCAGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAATATCACATTTGGCTTTACCCTATTCTTGTATGAGGTGTATGCATCATTTTCTGGACAGCCTGCATACAATGACTGGTTTCTGTCTCTGTATAATGTCTTCTTTTCATCACTTCCCGTGATTGCCCTTGGCGTCTTTGACCAGGATGTATCAGCTCGGTACTGCCAGAAATTTCCTTTGTTATATCAAGAAGGTGTGCAAAATGTCCTCTTTAGCTGGCGTCGAATACTTGGCTGGATGCTCAATGGATTCATCAGTGCCATAATAATTTTCTTCTTCTGCACAAAGGCAATGGAGATTCAGGCCTTTGACGAGGAGGGGAGAACCGCTGGGAGGGACATATTGGGAGCGACGATGTACACATGCGTGGTTTGGGTTGTGAACTTGCAGATGGCACTTTACATCAGTTACTTCACCTTGATTCAACATATTTTCATCTGGGGATCCATTGCGATCTGGTATCTCTTCCTCCTCGCGTACGGATCATTGCCTCCGAGCCTCTCCACAAATGCTTACAAAGTCTTCACTGAAACCCTTGCTCCATCTCCTTCCTTCTGGATTGTGACATTGTTTGTGGTGGTCTCAACTCTCATACCGTACTTCTCTTACTCAGCACTGCAGATGCGGTTCTTTCCTTTGTTTCACGAAATGGTGCAGTGGATTAGGTATGAAGGGAAGGCGAATGATCCCGAGTTTTGTGCTATGATGCGGCAGGGGTCGTTGAGGCCAACAACGGTTGGTTCGACAGCTCGCTTAGCAGCTAAGGATGATGATAACTTTACTAGAGAGAACGGCACTAACCATAGATGA 3585 0.4148 MRGERRKRLHFSKIYSFACGRASFKGDHSQIGGRGYSRVVFCNEPENFEVGIKNYADNSVTSTKYNIATFLPKSLFEQFRRVANFYFLVTGILAFTKLAPYTAVSAILPLIIIIAATMVKEGIEDWRRKKQDMEVNNRKVKVHKGHGTFEYTEWKNLKVGHIVKIMKDEFFPADLLLLSSSYEDSISYVETMNLDGETNLKLKQGLEVTSALHEDSEFSDFKATIKCEDPNANLYSFVGTLEFEEQQYPLSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVVQNSTNPPSKRSKVEKKMDRIIYFLFCILFLMAFVGSIFFGVATKDDLDDGVMKRWYLRPDDSTIFFDPKRAVAASVYHFLTALMLYGFFIPISLYVSVEIVKVLQSIFINQDIHMYYEEGDKPAHALTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERAMSRRIDSPLNIDIRESPDRSAPTIKGFNFADERIMNGNWVSEPYADVIQNFFRLLAICHTAIPDVDEEDTGNVTYEAESPDEAAFVIAAREIGFEFYKRTQTSLSMYELDPVSGEKVERTYKLLHVLEFNSSRKRMSVIVKDEEGRIMLLCKGADSVMFERLAKDGREFEEKTTEHVNEYADAGLRTLILAYRELDEELYNEFDSKFSQAKNSVTEDRETLIEEASDKIERNLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINVGFACSLLRQGMKQLIIQLETPEILALEKAGDKSAIAKASKENIRQQISEAIQQLAASRGTSQRAFALIIDGKSLAYALHDSIKDMFLELAIKCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYQRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCQKFPLLYQEGVQNVLFSWRRILGWMLNGFISAIIIFFFCTKAMEIQAFDEEGRTAGRDILGATMYTCVVWVVNLQMALYISYFTLIQHIFIWGSIAIWYLFLLAYGSLPPSLSTNAYKVFTETLAPSPSFWIVTLFVVVSTLIPYFSYSALQMRFFPLFHEMVQWIRYEGKANDPEFCAMMRQGSLRPTTVGSTARLAAKDDDNFTRENGTNHR* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1356 1194 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1144 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lja2g1356 1194 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Lja2g1356 1194 CDD P-type_ATPase_APLT_Dnf-like 57 1008 - -
Lja2g1356 1194 Gene3D - 695 899 IPR023214 -
Lja2g1356 1194 Gene3D - 534 694 IPR023299 GO:0000166
Lja2g1356 1194 PRINTS P-type cation-transporting ATPase superfamily signature 859 878 - -
Lja2g1356 1194 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lja2g1356 1194 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1182 - -
Lja2g1356 1194 Gene3D - 114 286 - -
Lja2g1356 1194 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1182 - -
Lja2g1356 1194 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lja2g1356 1194 SFLD Haloacid Dehalogenase 408 910 - -
Lja2g1356 1194 Pfam Cation transport ATPase (P-type) 521 620 - -
Lja2g1356 1194 SFLD p-type atpase 408 910 IPR044492 -
Lja2g1356 1194 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 492 695 IPR023299 GO:0000166
Lja2g1356 1194 SUPERFAMILY Calcium ATPase, transduction domain A 140 283 IPR008250 -
Lja2g1356 1194 SUPERFAMILY HAD-like 412 903 IPR036412 -
Lja2g1356 1194 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 827 941 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja2g1356 1194 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1137 IPR023298 -
Lja2g1356 1194 Pfam Phospholipid-translocating P-type ATPase C-terminal 887 1137 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1356 Lja-Chr2 12956033 12963217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1356 9 1180 Primary Pumps ATPases AT1G68710 74.234 0.0 1888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1356 2 12956033 12963217 Lja2g1356 2 12956033 12963217 ECH