Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1352 ATGGCAGCGATTCATTCACATATTGCTCGCTTGTGGGTCCCACCTCTCCATCGCTCTTCCTCTTCTCCCTCCAATCATCCCAAACTCCTCCTCTTCCGCCACTCTCCCTCCCTCTCCCTCCGCGCCCATTCCTCCGCCGAACAACACTCTCACTCCTCTTCCTCTGTCATCGATTTTCTCACTCTCTGCAACCGACTCAAGACCACGAAGAGGAAAGGATGGGTCAATCATGGGATAAAAGGTGCTGAATCGATTGCTGACCATATGTACCGCATGGCTATAATGGCACTGATTGCTGCCGATGTTCCTGGATTGAGTAGAGAAAGATGTATCAAAATAGCACTTGTGCATGACATTGCAGAAGCTATTGTCGGAGATATAACCCCATCTGATGGTGTGCCCAAGGCTGAAAAGAGTAGAATGGAGCAGGAAGCTTTGAACAAAATGTGTGAAGTTCTTGGTGGAGGGATGAGAGCTGAAGAGATCAAAGAACTATGGACAGAGTATGAAAATAATGCTTCTTTGGAGGCTAATCTTGTTAAAGATTTTGACAAGGTTGAAATGATTCTACAAGCGCTGGAATATGAAATGGAACATGGAAAAGTATTAGACGAATTTTTCCTTTCAACTGCAGGGAAGTTTCAAACTGAAATAGGAAAAAGTTGGGCATCTGAGATTATTTCTAGAAGAAAATCTTTATCAGCAAACAGGCTGAGTTGA 720 0.4431 MAAIHSHIARLWVPPLHRSSSSPSNHPKLLLFRHSPSLSLRAHSSAEQHSHSSSSVIDFLTLCNRLKTTKRKGWVNHGIKGAESIADHMYRMAIMALIAADVPGLSRERCIKIALVHDIAEAIVGDITPSDGVPKAEKSRMEQEALNKMCEVLGGGMRAEEIKELWTEYENNASLEANLVKDFDKVEMILQALEYEMEHGKVLDEFFLSTAGKFQTEIGKSWASEIISRRKSLSANRLS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1352 239 Gene3D Hypothetical protein af1432 41 238 - -
Lja2g1352 239 PANTHER UNCHARACTERIZED 40 237 IPR039356 GO:0002953
Lja2g1352 239 SUPERFAMILY HD-domain/PDEase-like 55 231 - -
Lja2g1352 239 ProSiteProfiles HD domain profile. 85 189 IPR006674 -
Lja2g1352 239 Pfam HD domain 63 219 IPR006674 -
Lja2g1352 239 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 40 237 - -
Lja2g1352 239 SMART hd_13 81 198 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1352 Lja-Chr2 12933091 12938874 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1352 2 12933091 12938874 Lja2g1352 2 12933091 12938874 ECH