Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1285 ATGGCTTTTATTTCAGAGGTTAACATGAGCTTCTCTAGCTATATGGATGATGAATATGAGAAACTCTTCAGGAGAATGAACCCTCCCAGGGTTGTAATTGATAATGATGCCTTGAAAAATGCCACTGTCATACGGGTTGATAGTGCAAACAAACATGGAATACTTCTCGAAGTTGTTCAAATCCTCACTGATTTAAACCTTATCATCACTAAGGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTTTTTAATGTCACTGGCCAAGATGGAAACAAGGTTACAGATGAAGCCATTTTGGATTACATTCATAAGGCTCTTGGTCCTGAATCTTGTGTTACATCTCCCGTGAGATCTGTTGGGGTTAAGCAAACATTAGACCACACTGCAATAGAGCTTATGGGAACTGATAGGCCAGGGCTGCTTTCAGAAGTGAGTGCTGTTCTCACCAACCTCAAGTGTAACATAGTGAATGCAGAGGTGTGGACTCACAACACCCGTGCAGCTGCTGTGATGCACGTGAGTGACGAAGAAACCGGATCCGCGATAACTGACCCGGAGAGGCTTTCTCTAATCAAGGAGCTTCTGAGTAATGTGCTTGGTGGTGGGAATAAGTGGAGGGGAGCCAAGACGGTTGTGGCTGATGAAGTCACACACACTGAGAGAAGGCTTCACCAGATGATGTTTGCTGATAGAGATTATGAACGTGTTGATGATGATGACTTTGATGAGAAGCAAAGACCAAATGTGACTGTGGTGAACTGGTCTGACAAGGATTATTCTGTGGTTACCATCATATCCAAGGATAGGCCAAAGCTTCTCTTTGACACCGTTTGTACTTTGACAGACATGCAGTATGTGGTTTTTCATGCTAATATTGATGCTGAGGGGCCACAAGCATATCAGGAATATTACATAAGGCATATTGACGGGTCCCCTGTAAAATCAGATGCAGAGAGACAAAGAGTGATTCAATGTCTTGAGGCTGCAATTGAGAGAAGAGTTTCTGAGGGTTTGAAGCTAGAACTCTGCACCACTGACAGAGTGGGACTACTATCTAATGTCACACGCATCTTCAGAGAGAACAGCTTAACAGTTACAAGAGCAGAAGTAACCACCAAAGGAGACAAAGCTGTGAACACCTTCTATGTTAGTGGTGCTTCTGGTTACCTTGTGGATTCCAAGACCATAGAATCTATTCGGCAAGCAATTGGAAACACTATACTTAAAGTAAAGGGTACCCCTGATGAGTTGAAATCTACCCACCAGGATTCTCCTACCAGATCTCTCTTTAGTGGCCTTTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGA 1356 0.4299 MAFISEVNMSFSSYMDDEYEKLFRRMNPPRVVIDNDALKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYIHKALGPESCVTSPVRSVGVKQTLDHTAIELMGTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVSDEETGSAITDPERLSLIKELLSNVLGGGNKWRGAKTVVADEVTHTERRLHQMMFADRDYERVDDDDFDEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIESIRQAIGNTILKVKGTPDELKSTHQDSPTRSLFSGLFKSRSFVNFGLVKSYS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1285 451 Pfam ACT domain 42 101 IPR002912 -
Lja2g1285 451 Pfam ACT domain 132 187 IPR002912 -
Lja2g1285 451 SUPERFAMILY ACT-like 39 107 IPR045865 -
Lja2g1285 451 SUPERFAMILY ACT-like 128 200 IPR045865 -
Lja2g1285 451 CDD ACT_ACR_1 41 111 - -
Lja2g1285 451 CDD ACT_ACR_3 261 335 - -
Lja2g1285 451 CDD ACT_ACR_2 130 203 - -
Lja2g1285 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 11 449 IPR040217 -
Lja2g1285 451 SUPERFAMILY ACT-like 337 407 IPR045865 -
Lja2g1285 451 ProSiteProfiles ACT domain profile. 131 218 IPR002912 -
Lja2g1285 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 11 449 - -
Lja2g1285 451 ProSiteProfiles ACT domain profile. 43 122 IPR002912 -
Lja2g1285 451 ProSiteProfiles ACT domain profile. 341 417 IPR002912 -
Lja2g1285 451 Gene3D - 127 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1285 Lja-Chr2 12280256 12284366 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1285 2 12280256 12284366 Lja2g1285 2 12280256 12284366 ECH