Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1269 ATGTCAATACCAGCAATAGTGTTTTATTATGTCCTGGCTTTGGTGCTTTGTACATTCTTTGCACTGCTGAAGTGGAACCAAGTAAGGTATGCAAGGAAAGGAATGCCACCAGGGACAATGGGTTGGCCTTTTTTTGGCGAGAGTGCACAGTTTCTCACACAAGGACCCAATTTCATGAAAGGACATAGATCAAGGTTTGGAAATGTATTCAAGACTCATGCTCTAGGCTCCCCTATGGTTGTGAGCATGGATCCAGACCTCAACAGACACATACTCATGAACGAGGATGCAAAAGGTCTAGTTCCTGGCTACCCTGACTCGATGAAGAACATACTAGGAGTTAACATTGCTGAGGTTCATGGCGCTCTGCATAAACGAATTAGAGGATCACTCTTGTCTCTTATTGGCCCGGTTGCAGTTAAGACTCGTCTTTTGCCAGAAGTTGACAAGTTTATGAGATCTTTCCTTGATAATTGGGCTGGTAAAATCATTGACATTCAACATAAAACCATACAGATGGCATTCCTTGTTTCTATAAAAACGGTGGTAGAAAACGAACCAAGTTCTTTTCTTGAATCCTTCAAAGCTACATTTGACGACATGTGGTTAGGAACAATATCTCTCCCAATTAAAATTCCAGGAACCAATTATTTTCGAGGACTCAAGGCTAGAGATAAAGTGGTTGCAATACTAAGAGAACTCTTAGCCAAGAGAAAAGCTTATTCACCAATCCATGAAGACATTCTTGATCAGCTTATAAGAAATGAGGATGTCAAGCACAAACTAGATGATGAAGAGATAATTGAACAAATAATCACAATCTTGTATTCAGGTTATGAAACTGTATCAACTACTACAATGATGGCTGTCAAATACCTCTCTGATAACCCAAGTGTTCTTCAAGCAATAAGGGAAGAGCATTTTGCAATCGCGCTTAAGAAAAAGCCTGAGGAAACAATCAGTTGGGAAGACTATAAGAGCATGAGCCGTACCCGTGCGGTGATTTTTGAAACCATGAGATTGGCTAGTGTTGTTAGTGGGGTGCTGAGGAGGACAACTACTGATGTAGAATTGAATGGCTTTATGATTCCTAAGGGATGGAGAGTGTATGCTTACACAAGGGAGACTAATTTTGATCCCATCCTCTATCCAGAGCCTTTCACTTTTAAACCCTGGAGATGGCTGGAGAAGGGCTTGGAAACTCATAACCATAACATGTTGTTTGGAGCAGGAGGGAGGGTGTGTCCTGGAAAGGAATTGGGCATGCTGAAGATCAGCCTTTTCCTTCACTATTTTGTGACTAAGTACAGGTGGGAAGAAGTAGAGGGAAACAAACTTCGGAAGTTCCCAAGAGTTATAGCACCAAAAGGACTGCATTTCAGGATCGCACAGTACTAG 1398 0.4163 MSIPAIVFYYVLALVLCTFFALLKWNQVRYARKGMPPGTMGWPFFGESAQFLTQGPNFMKGHRSRFGNVFKTHALGSPMVVSMDPDLNRHILMNEDAKGLVPGYPDSMKNILGVNIAEVHGALHKRIRGSLLSLIGPVAVKTRLLPEVDKFMRSFLDNWAGKIIDIQHKTIQMAFLVSIKTVVENEPSSFLESFKATFDDMWLGTISLPIKIPGTNYFRGLKARDKVVAILRELLAKRKAYSPIHEDILDQLIRNEDVKHKLDDEEIIEQIITILYSGYETVSTTTMMAVKYLSDNPSVLQAIREEHFAIALKKKPEETISWEDYKSMSRTRAVIFETMRLASVVSGVLRRTTTDVELNGFMIPKGWRVYAYTRETNFDPILYPEPFTFKPWRWLEKGLETHNHNMLFGAGGRVCPGKELGMLKISLFLHYFVTKYRWEEVEGNKLRKFPRVIAPKGLHFRIAQY* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1269 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Lja2g1269 465 Gene3D Cytochrome P450 26 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 SUPERFAMILY Cytochrome P450 29 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PANTHER CYTOCHROME P450 26 11 462 - -
Lja2g1269 465 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PANTHER CYTOCHROME P450 85A-LIKE 11 462 - -
Lja2g1269 465 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1269 465 Pfam Cytochrome P450 36 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1269 Lja-Chr2 12054135 12058997 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1269 2 12054135 12058997 Lja2g1269 2 12054135 12058997 ECH