Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1255 ATGGATCGGAACTCGTTCTCCCCCCGAACCCGGAAAACCCGACCCAAATCTGACATATACTCCACCGTCGTGGTCCATGACGACGGCGACGACGACGCCGATGCTGACCGGCGGCGGAAACCCGGAGTCACGGAAGTTCAGGACGATCCATACGCGACAATGGTGTTCAAAGACAACGGCCACGACGACGACGATGACGACGAAGATTCCTCTCTTCCTCCGCTACTCAAGCGCCTTCCCAAGGACTTCGGCGGCGGAGCAGGGCTGGACTATGAGGACGACGACGAAGACGATTACTCCGGCGACTTCGGCACCATGATCGTGAAGACTGACCGGAGCCAGCATCGCGATCGGTCTTCTTCTTCTTCCGGATTGGGTTCGCCGGCGGCGGGCTCGACCTGGAAAGCTCGGAGCTCTTCTATTTTGAATAAGTTCAGGGAAGGGGACGACGACGAACGCGACGGTGACGGCGGCGGCGAGTTTTCAACCTTCGTTGTGCGTTCGACTGTGAAATCCGTCGAGAGAGAGTCAGTGAGTGGAACCATGGTGCGGCGGACGGGAGGCGGCGGCGGCGGCGGTTCGACGATGGAGAGGGCGGTGGCGAGTATGCAGGCGGTTGGGGAGCCTGGATTCGGGAAGCAGAGGAGGGCAAGTGGATCCTCACAGAACGAGGAAGCGAAGCATCAATCGTTAACAGCCAAAGTTTCGTCGAGTTCGATTCCTGAGAGTGTTACCAGAGAGGACCCTACCACCAAGTACGAATTGCTCAATGAACTTGGTAAGGGGTCCTATGGAGCTGTTTACAAAGCAAGGGATTTAAGAACCTCTGAAATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGATATGAGGAAATCCGGGGTGAGATTGAGATGTTACAACAGTGTAATCATCCGAATGTTGTTCGTTATCTTGGAAGCTATCATGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTCATGAACGTGAATGAAGAACCACTGGATGAAGTTCAAATAGCATATATCTGTAGAGAAGCATTAAAGGGACTTGACTATTTGCACTCGATTTTTAAAGTTCATAGAGACATTAAAGGTGGGAATATCTTATTAACGGAACAAGGAGATGTCAAGCTAGGAGACTTTGGTGTTGCTGCCCAGCTTACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACTCCTCATTGGATGGCTCCGGAAGTCATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCCGAGGGTGCTCCTCCAAGATCATCAGTGCATCCAATGAGGGTTATATTCATGATATCCATCGAACCAGCTCCGATGCTTGAGGATAAAGAAAAATGGTCTTTATATTTCCATGATTTTGTTGCAAAGTGCCTAACCAAAGAACCTCGACTCCGCCCTACTGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAATGGAAATCTGGATCTGCTGCAATGTTGCCCAAACTAGAAAAGGCAAGGCAAATCAGGGCTTCCATGGCTTTGCAGGTGCAAACTCTTCCTCCAGCTGCATCAGACGATCAGCCAATGTTAGCTTCAAAACTAAATGACGAATATGGAGATACTGTTCCATCCAGACCTCATAATATGAACGTTGTGGGGGCTGCTGATCTTTCATCACATGGCACTATGAGGAAGCTGCAGAAGGTGGAAGACGTTGACACAAGTGAAGGCAACTTTGGCACTGTAATAGTCCATGGAGATGAATTACGCAAGGCCACACAGGATGCAGACTCTGCATTTTTCTTACCTGCTCTCACCAGTGGCACAGGAGGCAGATATTCTGACCCTGGGGTCGAGCATCTGAAAGTTGGTGACATGAACACTGCGTCTTTTAGAGGATCTAGTTCTACTACAGATACCTTAAATTCGTCTTTACCTTATGCTAGTAATTCAACTGAGGAAAACTTCAAAACAAAAGGTAGCCTTCGAGCACAAACTGGAATTGGTAGTGGTATGAGCACTAGCACATTGAAGAATGAAACAGTCAGCCGCAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCTGGTAATACAGTACCCATACCATTCTTAAGGGCAACAGATATATCACCTATTGCGCTCCTTTCAGACAATGTTCTTGGTGGCGTGCGACAGGATACCAGTGGAACTGGAGCAATAGAAGCATTACAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAGAGTCGGAGAGGAATTAATGAGATGCCACTTCCTCCAAGCATTTACCAAAGATTGACATCGAGTTCTACTCTAATGAACTTGGCACAGGCTTTAGCTTACCATAAAATGTGTTATGAAGATATGCCATTGCAAGAGCTGCAAGCAACCCAGGAACAGCGGACTATCCAAAATCTCTCAGACACACTTCGGACCATTCTTCGATTGTAG 2520 0.4786 MDRNSFSPRTRKTRPKSDIYSTVVVHDDGDDDADADRRRKPGVTEVQDDPYATMVFKDNGHDDDDDDEDSSLPPLLKRLPKDFGGGAGLDYEDDDEDDYSGDFGTMIVKTDRSQHRDRSSSSSGLGSPAAGSTWKARSSSILNKFREGDDDERDGDGGGEFSTFVVRSTVKSVERESVSGTMVRRTGGGGGGGSTMERAVASMQAVGEPGFGKQRRASGSSQNEEAKHQSLTAKVSSSSIPESVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYHGEEYLWIVMEYCGGGSVADLMNVNEEPLDEVQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGAPPRSSVHPMRVIFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKSGSAAMLPKLEKARQIRASMALQVQTLPPAASDDQPMLASKLNDEYGDTVPSRPHNMNVVGAADLSSHGTMRKLQKVEDVDTSEGNFGTVIVHGDELRKATQDADSAFFLPALTSGTGGRYSDPGVEHLKVGDMNTASFRGSSSTTDTLNSSLPYASNSTEENFKTKGSLRAQTGIGSGMSTSTLKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGVRQDTSGTGAIEALQELFSGDGQSKKSRRGINEMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1255 839 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 194 829 - -
Lja2g1255 839 MobiDBLite consensus disorder prediction 215 246 - -
Lja2g1255 839 SUPERFAMILY Protein kinase-like (PK-like) 235 528 IPR011009 -
Lja2g1255 839 Gene3D Transferase(Phosphotransferase) domain 1 249 539 - -
Lja2g1255 839 MobiDBLite consensus disorder prediction 1 45 - -
Lja2g1255 839 Pfam Protein kinase domain 253 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1255 839 ProSitePatterns Protein kinases ATP-binding region signature. 259 282 IPR017441 GO:0005524
Lja2g1255 839 MobiDBLite consensus disorder prediction 172 195 - -
Lja2g1255 839 MobiDBLite consensus disorder prediction 209 249 - -
Lja2g1255 839 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 194 829 - -
Lja2g1255 839 MobiDBLite consensus disorder prediction 119 137 - -
Lja2g1255 839 CDD STKc_MAP4K3_like 252 507 - -
Lja2g1255 839 SMART serkin_6 253 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1255 839 MobiDBLite consensus disorder prediction 1 137 - -
Lja2g1255 839 MobiDBLite consensus disorder prediction 650 683 - -
Lja2g1255 839 ProSiteProfiles Protein kinase domain profile. 253 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1255 Lja-Chr2 11919567 11932752 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Lja2g1255 Pkinase 1.6e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1255 2 11919567 11932752 Lja2g1255 2 11919567 11932752 ECH