Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1234 ATGGCTGCGGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCTGAACAGGCCGAGAGATATGAAGAAATGGTAGAATGTATGAAGAATGTTGCAAAACTTGATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATATAAAAATGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATTATGTCCTCAATCGAGCAGAAGGAAGAGACTAAGGGAAATGAGCACAATGTTAAGCAGATCAAGAATTACCGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGTGGTGACATCCTGACTATTATAGACCAGCATCTAATTCCTTCTTCCGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGAAAGGTGATTATTATCGGTATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAAGAGGCAGCCGAGCAGTCACTCAAGGGATATGAGGCTGCTTCAGCCACTGCCAACACCGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTACGAGATCATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAAGATGGAGGCGAGGAGAACATAAAAGCTGAAGAAGCCAAACCTACTGAGCCTGAGAATTAA 780 0.4487 MAAEKERETQVYLAKLAEQAERYEEMVECMKNVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEETKGNEHNVKQIKNYRQKVEEELSKICGDILTIIDQHLIPSSASAEASVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENIKAEEAKPTEPEN* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1234 259 Coils Coil 13 33 - -
Lja2g1234 259 SMART 1433_4 7 249 IPR023410 -
Lja2g1234 259 Pfam 14-3-3 protein 13 235 IPR023410 -
Lja2g1234 259 Coils Coil 195 215 - -
Lja2g1234 259 MobiDBLite consensus disorder prediction 241 259 - -
Lja2g1234 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Lja2g1234 259 PANTHER BNAC03G57490D PROTEIN 3 254 - -
Lja2g1234 259 PIRSF 14-3-3 1 248 IPR000308 -
Lja2g1234 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lja2g1234 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Lja2g1234 259 MobiDBLite consensus disorder prediction 237 259 - -
Lja2g1234 259 Gene3D - 1 249 IPR036815 -
Lja2g1234 259 PANTHER 14-3-3 PROTEIN 3 254 IPR000308 -
Lja2g1234 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Lja2g1234 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lja2g1234 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Lja2g1234 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Lja2g1234 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lja2g1234 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1234 Lja-Chr2 11669733 11673076 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1234 2 11669733 11673076 Lja2g1234 2 11669733 11673076 ECH
Lja4g3513 4 66070185 66074909 Lja2g1234 2 11669733 11673076 PCT