Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja2g1214 | ATGGAGATGGAAGTAGACAGTGAGAAGAACCAGCAAGACACAGTGATGGTGAAAGAGAAGGATCTCTTCAAAGCTGCTGAAGAAGGTGACACCTCAACCTTCCAAGCATCGTCCCCTGAAACACTCTCCGAATCCCTCTCTCTAAGGAACGAAGACGCTCGCTCCCTTCTCCATGTTGCCGCTTCTTCCGGCCACTCCCAGGTGGTGAAGATATTGTTGTCTGCTGATGCATCAGCTAGTGTGGTAAATAGTGCTGATGATGAAGGGTGGGCGCCGCTTCATTCTGCGGCCAGCATTGGGAATTTGGAGATAGTGGAGGCTTTGTTGAGCAAAGGAGCTGATGTTAATCTAAAAAATGGCGGGGGCCGAACAGCTTTACACTATGCCGCCAGTAAAGGTCGGGTGAAGATTGCTGAAATACTCATCTCACATGATGCCAAGATTAATATAAAGGACAAGGTTGGTTGCACCCCATTGCATCGGGCAGCGAGCACTGGGAACTCTGAGTTGTGTGAACTTCTGATTGAAGAAGGGGCAGAGGTTGATGCTGTAGATAGAGCTGGTCAAACTCCTTTAATGAGTGCTGTAATTGACCGTAACAAAGAGATCGCCCTTCTTCTTATAAGACATGGAGCAGATGTGGATGTGGAGGACAAGGAAGGGTACACAGTGCTCGGTCGAGCTACAGATGAGTTTAGAGCAATATTAATCGATGCTGCCAAGGCCATGCTTGAGTAA | 738 | 0.4824 | MEMEVDSEKNQQDTVMVKEKDLFKAAEEGDTSTFQASSPETLSESLSLRNEDARSLLHVAASSGHSQVVKILLSADASASVVNSADDEGWAPLHSAASIGNLEIVEALLSKGADVNLKNGGGRTALHYAASKGRVKIAEILISHDAKINIKDKVGCTPLHRAASTGNSELCELLIEEGAEVDAVDRAGQTPLMSAVIDRNKEIALLLIRHGADVDVEDKEGYTVLGRATDEFRAILIDAAKAMLE* | 246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat profile. | 121 | 153 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat region circular profile. | 154 | 186 | - | - | |
| Lja2g1214 | 245 | Pfam | Ankyrin repeats (3 copies) | 49 | 119 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | Pfam | Ankyrin repeats (3 copies) | 155 | 218 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | Pfam | Ankyrin repeat | 122 | 153 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | PRINTS | Ankyrin repeat signature | 203 | 217 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | PRINTS | Ankyrin repeat signature | 122 | 137 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | Gene3D | - | 13 | 125 | IPR036770 | - | |
| Lja2g1214 | 245 | PANTHER | MYOTROPHIN | 49 | 155 | - | - | |
| Lja2g1214 | 245 | PANTHER | MYOTROPHIN | 52 | 233 | - | - | |
| Lja2g1214 | 245 | Gene3D | - | 126 | 245 | IPR036770 | - | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat profile. | 154 | 186 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat region circular profile. | 121 | 153 | - | - | |
| Lja2g1214 | 245 | SMART | ANK_2a | 154 | 183 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | SMART | ANK_2a | 121 | 150 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | SMART | ANK_2a | 88 | 117 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | SMART | ANK_2a | 52 | 81 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | SMART | ANK_2a | 187 | 216 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat region circular profile. | 187 | 219 | - | - | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat region circular profile. | 52 | 83 | - | - | |
| Lja2g1214 | 245 | SUPERFAMILY | Ankyrin repeat | 22 | 229 | IPR036770 | - | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat profile. | 88 | 120 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat region circular profile. | 88 | 119 | - | - | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat profile. | 187 | 219 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | ProSiteProfiles | Ankyrin repeat profile. | 52 | 84 | IPR002110 | GO:0005515 | |
| Lja2g1214 | 245 | Coils | Coil | 237 | 245 | - | - |
Event-related genes