Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1211 ATGTATAGGCCTGTGGCTGCAGCTTCAGCCACGCCGCGGGGTGGATTGCCGAATGACAGTGTGGACTCTGTTGTGACTCTAGATCAAGTGCCGCGGTGGATTGACGCTGAGCATTCGTTGGGGTATGATAATGGGGATTCGTCGTATCCTAGCTCGTATTTTCCCGATCCTTTGACGTTCCAATCGGGATCGGAGAGCGGCGGCAGTGGTTCGGTGTCGAGGTTTCCTGTTGACCATGAAGTTAATTCGAGGATATACTTGTGGAGGGGGACTCCGTGGAACCTTGAGGTGGATGCTGTGGTAAATTCTACAAATGAGGTCTTGGATGAAGCACACAGCAGCCCTGGTTTGCATGCTGCTGCTGGACCTGGTCTTGCAGAAGAATGTGCCACTTTGGGTGGGTGTCGAACAGGGATGGCAAAAGCTACCAATGCATATGATCTTCCTGCAAGGAAAGTTATCCATACTGTGGGCCCAAAGTATGCGGTGAAGTACCACACTGCTGCAGAGAATGCTTTAAGTCATTGCTATCGATCTTGCCTGGAGCTTCTAGTTGAAAATGGGCTTCGAAGCATTGCTATGGGCTGTATTTATACTGAAGCGAAGAACTATCCCCGTGAACCAGCTGCACATGTAGCTATAAGAACTGTCCGACGGTTTCTTGAGAAGCAGAAAGACAATATAACAGCTGTTGTCTTTTGCACTACCAGCACAGCTGATACTGAGATATATAAAAGGTTGCTACCACTTTACTTTCCTCGGGATAAACATGAAGAGGCAGTGGCTTTGTCAAAGCTTCCTGCAGATGTTGGGGATGAGAATGGTGAGACCACCATAGATGAGCGTAAAATCAGAATCAAGCCTTTGCCTAAAAAAAATGTTCCAAAACCTCCTAAAGATCCAGTTGATCTTCCTGTTAGTGATGTTGGCATGGTTCGCAGGACTTCATCATATTTAGATTCATTTCTGGATCCTGCCTTCATGTCCTTGATTAAAGACCCTGATGAAAGACGTCTGGAGCAGTGGGAGAAAACTGTCCAAGCACAAAGAGGCTGGAACTTTGCTAAATTGCTTGGATTTGGTGACCTAGGTGCACCTGCATTATCTGCTGCCGAAGAGTATTCTCTGCACTCTAGATATCTTTCTAAAGCAAATTCCTTAAATCTTTCTGAAATTGCAGAGATGAAAATTGTCTATCGTGGAGGGGTAGATAGTGAGGGTCGTCCTGTCATGGTTGTTGTGGGGGCTCACTTCTTGCTTAGATGTCTTGATCTGGAAAGATTTGTGCTTCATGTAGTGAAGGAATTCGAGCCTATAATACAAAAGCCTTATACTATTGTCTACTTCCACTCTGCTGCATCTCTGCAGATGCAACCAGACCTAGGTTGGATGAAAAGATTGCAACAAATACTTGGACGGAAGCACCAACGCAACCTGCATGCAATATATGTCCTCCACCCAACTATTGGACTAAAAATGGCAGTATTTGCGCTTCAGTTGCTTGTGGACAATGCGGTTTGGAAGAAAGTGGTTTATGTTGATAGATTACTGCAGCTCTTCAGATACGTACCTCGTGAGCAGTTGACCATCCCAGATTTTGTATTCCAGCATGACTTAGAAGTGAATGGAGGAAAGGGTCTTATTGTTGATCCCAGAACAAAATACGTTTACCACAGACCATGA 1683 0.4551 MYRPVAAASATPRGGLPNDSVDSVVTLDQVPRWIDAEHSLGYDNGDSSYPSSYFPDPLTFQSGSESGGSGSVSRFPVDHEVNSRIYLWRGTPWNLEVDAVVNSTNEVLDEAHSSPGLHAAAGPGLAEECATLGGCRTGMAKATNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLVENGLRSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDNITAVVFCTTSTADTEIYKRLLPLYFPRDKHEEAVALSKLPADVGDENGETTIDERKIRIKPLPKKNVPKPPKDPVDLPVSDVGMVRRTSSYLDSFLDPAFMSLIKDPDERRLEQWEKTVQAQRGWNFAKLLGFGDLGAPALSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPIIQKPYTIVYFHSAASLQMQPDLGWMKRLQQILGRKHQRNLHAIYVLHPTIGLKMAVFALQLLVDNAVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1211 560 CDD Macro_GDAP2-like 83 251 IPR035793 -
Lja2g1211 560 SMART sec14_4 391 537 IPR001251 -
Lja2g1211 560 Pfam Macro domain 101 213 IPR002589 -
Lja2g1211 560 SUPERFAMILY Macro domain-like 71 281 IPR043472 -
Lja2g1211 560 SMART YBR022w_8 84 213 IPR002589 -
Lja2g1211 560 Gene3D - 390 541 IPR036865 -
Lja2g1211 560 SUPERFAMILY CRAL/TRIO domain 389 528 IPR036865 -
Lja2g1211 560 Gene3D Leucine Aminopeptidase, subunit E, domain 1 17 257 IPR043472 -
Lja2g1211 560 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 540 - -
Lja2g1211 560 MobiDBLite consensus disorder prediction 272 306 - -
Lja2g1211 560 MobiDBLite consensus disorder prediction 53 71 - -
Lja2g1211 560 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 540 - -
Lja2g1211 560 CDD SEC14 395 531 IPR001251 -
Lja2g1211 560 MobiDBLite consensus disorder prediction 53 74 - -
Lja2g1211 560 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 385 534 IPR001251 -
Lja2g1211 560 MobiDBLite consensus disorder prediction 1 22 - -
Lja2g1211 560 Pfam Divergent CRAL/TRIO domain 407 538 IPR001251 -
Lja2g1211 560 MobiDBLite consensus disorder prediction 275 298 - -
Lja2g1211 560 ProSiteProfiles Macro domain profile. 72 252 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1211 Lja-Chr2 11486427 11494539 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1211 2 11486427 11494539 Lja2g1211 2 11486427 11494539 ECH