Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g6078 ATGGATCAAGAACTACACATATTGTTCTTTCCCTTTCTGGGTCATGGACACATGATACCCATGAGTGATATGGCCACACTCTTCGCTACAAGAAGAGGGGTGAGGGCAACTATAGTTACCACCCCCCTGAACGCACCTACTATTTCTAGGACAATACAAGAAGGAGGAGAAGATGAAGGAACTCATGCCAATATACAAATCCGAACCATCAAATTCCCGTGTGCAGAGGCTGGCTTGCCCGAAGGATGCGAGAATCCAGATTTAGTCCCCTCCTCGGCCATGATTCCTAACTTCCTCAAGGCAACGACAATGCTACAAGGCCCCTTGGAACACCTCCTCCTCCAAGAACATCCAGATTGCCTTATTGCCAGTGCTTTCTTCCCTTGGGCAACTGATTCTGCTGCTAAATTCAATATCCCAAGGATCGTCTTTCACGGCACTGGTGTGTTCTCCTTGTGTGCTGCAGAATGCATCCGCCTCTACGAGCCTCACAAGAAGGAGAATATTGTTTCTTCTGATTCAGAGCCCTTTGTGATTCCTCATCTTCCCGGTGCCAAGGAGATAACAATGACAAGGAATGCTTTGCCTGATTACGTTAAAAGCGACGATGAAGAAGCTGAATCCTCAAGGTCAAGAATAGTGAAGGCTATCAAGGAATCAGAGGTCACGAGCTTCGGAGTGGTTGTTAACAGCTTTTATGAACTTGAGCAGATCTACGCAGATTATTACGACGAGGTGCAGGGAAGGAAAGCGTGGTACATAGGCCCGGTTTCTCTATGTCGTGGTGGGGAGGACAAGCACAAGGCCAAGAGAGGTTCAATGAAGGAAGGAGTGTTGTTGAAGTGGCTTGACTCTCAGAAACCCAAGTCAGTGGTGTACGTTTGCTTTGGAAGTATGACGAACTTCAGTGAAACTCAGTTGAAAGAAATAGCGACAGGACTTGAGGCATCCGGACAACAATTCATATGGGTTGTGAGGAGGACCGATCAAGTTCAAGAGTGGTTGCCGGAAGGGTTTGAGAGAAGAATGGAAGGCAGGGGAGTAATTATCAGGGGCTGGGCACCACAAGTGTTGATTCTGGACCATGAAGCTGTTGGGGGATTCGTGACACACTGCGGATGGAATTCCACACTAGAAGCAGTGTCAGCAGGGGTGCCCATGGTGACTTGGCCTGTGTCCGCAGAGCAATTTTACAATGAAAAACTTGTGACTGATATCCTTGAAATTGGAGTCCCAGTTGGTGTGAAGAAATGGGCTAGAGTTGTGGGGGATGATAGCATAACAAGTTCCGCTGTTGAGAGGGCAATCAATCGTATAATGGTACAGGAAGAAGCAGAGTCATTCAGAAACAGAGCACACAAACTTGCACAGGTGGCCAGGACAGCCGTGCAAGACAACGGATCATCTCACTCTCACTTGACTGCTTTGATTCAACAACTTCGCTTTGCCACCATGCCTGCGTTTGCCTTGCCATAA 1476 0.4783 MDQELHILFFPFLGHGHMIPMSDMATLFATRRGVRATIVTTPLNAPTISRTIQEGGEDEGTHANIQIRTIKFPCAEAGLPEGCENPDLVPSSAMIPNFLKATTMLQGPLEHLLLQEHPDCLIASAFFPWATDSAAKFNIPRIVFHGTGVFSLCAAECIRLYEPHKKENIVSSDSEPFVIPHLPGAKEITMTRNALPDYVKSDDEEAESSRSRIVKAIKESEVTSFGVVVNSFYELEQIYADYYDEVQGRKAWYIGPVSLCRGGEDKHKAKRGSMKEGVLLKWLDSQKPKSVVYVCFGSMTNFSETQLKEIATGLEASGQQFIWVVRRTDQVQEWLPEGFERRMEGRGVIIRGWAPQVLILDHEAVGGFVTHCGWNSTLEAVSAGVPMVTWPVSAEQFYNEKLVTDILEIGVPVGVKKWARVVGDDSITSSAVERAINRIMVQEEAESFRNRAHKLAQVARTAVQDNGSSHSHLTALIQQLRFATMPAFALP* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g6078 491 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 285 404 IPR002213 GO:0008194
Lja1g6078 491 PANTHER UDP-GLUCOSYL TRANSFERASE 73B2-RELATED 3 481 - -
Lja1g6078 491 Gene3D Glycogen Phosphorylase B; 279 464 - -
Lja1g6078 491 Gene3D Glycogen Phosphorylase B; 1 278 - -
Lja1g6078 491 CDD GT1_Gtf-like 5 480 IPR002213 GO:0008194
Lja1g6078 491 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Lja1g6078 491 PANTHER GLYCOSYLTRANSFERASE 3 481 - -
Lja1g6078 491 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g6078 Lja-Chr1 111646511 111648475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g6078 3 480 Glycosyltransferase AT2G15490 48.057 5.21e-163 468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0360 5 3208692 3210095 Lja1g6078 1 111646511 111648475 PCT