Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4811 ATGGCTTTGTCAAGCACAAAGCTACAAAGGTTCCTCTTCAGCAAACTCCATGGCCGTTCCACCATCTCCAAGAACGCCCACAGAAGCAGCTTCACCATCGGAAACAGCACTACCCGGTGCTGCTCCGCCATAGCCATTGATGCCCCATCATCTATGACTGAGACTCCTGCTATAAGATGGGGATCGGTTTCTCTGCAGGGTCCCCGTGAAGAGATGGAAGATGATATCGTTGTTCGATCTGATGGGCTTGATGGGTTCTCTTTTGCTGCTGTGTTTGATGGCCATGGAGGGTTTTCTTCTGTTGAGTTTCTCAGGGATGAGCTGTACAAGGAGTGTCTTGAAGCTTTACAAGGTGGGTTACTATTAGCTGGGAAAGATTTCAAAGCCATTAAAGAAGCACTAGAGGAGGCATTTATCAAGACTGACGCAAGGTTATTAAAATGGCTTGAAATGAATGGGGAGGATGATGAATCGGGTGCTACAGCAACTGCAATGTTCACAGGAGATGATGAGCTGCTAATTGCACATATTGGTGACTCATCTGCGGTTCTATGCAGATCTGGAAAAGCAGAAGTGCTGACTAGTCCACACAGACCATGTGGGAGTAACAAGACTTCCCTCCAAGAAATCAAGAGAATCAGAGAAGCAGGTGGATGGCTTAACAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACCAGAGATTCAAAACAAAGAAGAATGAAATGCTGCAAAAAGGAGTTGAGGAAGGAACATGGTCAAAAAAGTTTATTTCTCGTGTACAGTTCAACAATGACTTGGTTGTTGCATTCCCTGATGTTTATCAAGTAGCACTTGGCTCAGATACAGAATTTGTAGTACTAGCATCTGATGGCTTATGGGATTACATGAGCAGTTCAGATGCAGTTTCTTTTGTGAGGGATCAGCTACGGAAACACGGAAACATACAGCAAGCTTGTGAAGCGCTTGCAAACGCAGCTCTGGATCGGCGTACACAGGATAATGTCAGCATTATAATTGCTGATTTAGGGAGGACAGACTGGCAGAATGCGCCTGTACAGCGACAAAATGTTGTATTTGAGCTAGTCCAAGCGCTTGCTACCATTGGAATTGTGTCTTTTGGAATTTGGTTTTCATCACAGCTTTCTTTATAG 1167 0.4473 MALSSTKLQRFLFSKLHGRSTISKNAHRSSFTIGNSTTRCCSAIAIDAPSSMTETPAIRWGSVSLQGPREEMEDDIVVRSDGLDGFSFAAVFDGHGGFSSVEFLRDELYKECLEALQGGLLLAGKDFKAIKEALEEAFIKTDARLLKWLEMNGEDDESGATATAMFTGDDELLIAHIGDSSAVLCRSGKAEVLTSPHRPCGSNKTSLQEIKRIREAGGWLNNGRICGDIAVSRAFGDQRFKTKKNEMLQKGVEEGTWSKKFISRVQFNNDLVVAFPDVYQVALGSDTEFVVLASDGLWDYMSSSDAVSFVRDQLRKHGNIQQACEALANAALDRRTQDNVSIIIADLGRTDWQNAPVQRQNVVFELVQALATIGIVSFGIWFSSQLSL* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4811 388 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Lja1g4811 388 Gene3D - 58 354 IPR036457 -
Lja1g4811 388 PANTHER PROTEIN PHOSPHATASE 2C 8 384 IPR015655 GO:0004722|GO:0006470
Lja1g4811 388 SMART PP2C_4 49 345 IPR001932 -
Lja1g4811 388 PANTHER PROTEIN PHOSPHATASE 2C 57 8 384 - -
Lja1g4811 388 SUPERFAMILY PP2C-like 50 348 IPR036457 -
Lja1g4811 388 ProSiteProfiles PPM-type phosphatase domain profile. 59 347 IPR001932 -
Lja1g4811 388 CDD PP2Cc 58 347 IPR001932 -
Lja1g4811 388 Pfam Protein phosphatase 2C 61 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4811 Lja-Chr1 65505747 65510409 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4811 1 65505747 65510409 Lja1g4811 1 65505747 65510409 ECH
Lja1g4811 1 65505747 65510409 Lja5g3194 5 61953114 61955666 PCT