Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4132 ATGGGGCGTTGGGCAATTGCCGTGCATGGTGGGGCTGGTGTGGACCCTAATCTCCCTCTCCACCGCCAAGAAGAAGCCAAACAACTCCTTACCCACTGTCTCAATCTTGGTATCTCTGCTCTCCGTTCCAATGCTTCCGCCATTGATGTCGTTGAACTTGTCGTGAGAGAATTGGAGACAGATCCCCTGTTCAACTCAGGGCGTGGATCCGCCCTGACTGAAAAGGGAACGGTGGAAATGGAGGCATCCATCATGGACGGCACCAAGCGAAGATGCGGCGCTGTTTCCGGCCTCACCACCGTCAAAAACCCCATCTCCCTCGCTCGCCTTGTCATGGACAAATCCCCTCATTCCTACCTCGCCTTCTCCGGCGCTGAAGATTTCGCCAAGCAACAAGGAGTGGAAGTTGTGGAGAATGAATACTTCATAACTCCTGATAATGTTGGTATGCTGAAACTGGCAAAAGAGGCAAACACGATTCTGTTTGATTACAGGATTCCGAACGAAACGTGCGGTGCGGGAGTTGAGAGTCCACTGAAGATGAATGGACTGCCCCTCAGCGTATACGCACCGGAGACTGTTGGGTGTGTGGTGGTTGACAGCGAGGGGAGGTGTGCCGCCGCCACGTCGACAGGGGGCCTGATGAACAAGATGACCGGTCGGATCGGTGACTCGCCGCTCATCGGCGCTGGGACGTACGCGTGTGAGGTTTGCGGCGTTTCATGCACCGGGGAAGGGGAGGCGATCATACGTGGCACGCTGGCGCGTGAGGTGGCGGCGGTGATGGAGTACAAGGTGCTCGGCCTTCAGGAGGCGGTGGACTTTGTTATCAAAACACGGCTGGATGAAGGGATGGCGGGCCTCATTGCGGTGTCGAATAAGGGTGAAGTGGCCTGTGGGTTTAACTGTAATGGCATGTTTAGGGGTACTGCTACTGAGGATGGGTTCATGGAGGTGGCAATTTGGGAATGA 972 0.5556 MGRWAIAVHGGAGVDPNLPLHRQEEAKQLLTHCLNLGISALRSNASAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFAKQQGVEVVENEYFITPDNVGMLKLAKEANTILFDYRIPNETCGAGVESPLKMNGLPLSVYAPETVGCVVVDSEGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYKVLGLQEAVDFVIKTRLDEGMAGLIAVSNKGEVACGFNCNGMFRGTATEDGFMEVAIWE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4132 323 PANTHER L-ASPARAGINASE 1 323 IPR000246 GO:0016787
Lja1g4132 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 322 IPR029055 -
Lja1g4132 323 PANTHER BNAC01G35480D PROTEIN 1 323 - -
Lja1g4132 323 Gene3D (Glycosyl)asparaginase 193 323 - -
Lja1g4132 323 Pfam Asparaginase 4 322 IPR000246 GO:0016787
Lja1g4132 323 CDD Asparaginase_2 5 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4132 Lja-Chr1 52473033 52474620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4132 3 283 Miscellaneous Gene Families AT4G00590 28.155 1.64e-19 86.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4132 1 52473033 52474620 Lja1g4132 1 52473033 52474620 ECH
Lja5g3115 5 60876535 60879198 Lja1g4132 1 52473033 52474620 PCT