Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4131 ATGCCTTCCTTGTTACTGTTGATATTCCTGATTCAAGCATGGCCAATGAGGCTACAAGCTGATGACACAAACATATTCATATTGGCCGGACAGAGCAACATGGCAGGAAGGGGCGGCGTGACGAACGACACCGCCACGGGAGCCACCACCTGGGACGGCATCGTTCCTCTCCAGAGCCGCCCCAACCCCTCAATTCTGAAACTCGACGCGCAGCTGAGGTGGGTGGAGGCACGCGAACCGCTCCACGCAGACATCGACCGGGAGAAGACAAATGGGGTTGGACCGGGTTTGGCTTTCGCTAACTCGGTGGTGGAAAAAAACCCGGGTTTCGGTGTTGTGGGTTTGGTCCCTTGTGCGATTGGTGGCACCAATATTAGTGAGTGGGAGCGGGGGAAAGTGCTTTACAGCCACATGATGAAGAGGGTCCAGGCTTCCTTGCGTGATGGTGGTTCCATTCGAGCACTGCTCTGGTTTCAAGGGGAATCTGATACAGAGAATTTAAACGATGCCCAATCGTATCAGAGAAGAGTTACTAAATTTTTCTCTGATGTTCGTGATGATCTTCAATCTCCATTGCTTCCCATAATCCAGGTGGCTTTGGCATCAGGAGTAGGCCCATACGTAGATATAGTAAGACAAGCTCAGCTGGACATTGACCTCTTGAACCTGAGAACTGTGGACGCTCTGGGATTGGGCCTTCAGCCTGATGGGCTCCACCTTTCGAGCCCGGCCCAAGTTAATCTTGGACATATGATGGCTAATGCATTCCTTCAGTTCGTACCAGCTACACCTTCAATTCCAATTGCAAATTCCAATGTTAGTCCAAAACCTAATGAGGCTTCCATTAGGCTTCATAATAACTGTGCTTCTGATATTTGTATGTTCCCATTGTTCATAGTATTTCTCACAATTATGTCCATAACATTCTTATAG 933 0.4909 MPSLLLLIFLIQAWPMRLQADDTNIFILAGQSNMAGRGGVTNDTATGATTWDGIVPLQSRPNPSILKLDAQLRWVEAREPLHADIDREKTNGVGPGLAFANSVVEKNPGFGVVGLVPCAIGGTNISEWERGKVLYSHMMKRVQASLRDGGSIRALLWFQGESDTENLNDAQSYQRRVTKFFSDVRDDLQSPLLPIIQVALASGVGPYVDIVRQAQLDIDLLNLRTVDALGLGLQPDGLHLSSPAQVNLGHMMANAFLQFVPATPSIPIANSNVSPKPNEASIRLHNNCASDICMFPLFIVFLTIMSITFL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4131 310 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 23 258 IPR005181 -
Lja1g4131 310 Gene3D SGNH hydrolase 22 260 IPR036514 -
Lja1g4131 310 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 23 265 - -
Lja1g4131 310 SUPERFAMILY SGNH hydrolase 24 264 - -
Lja1g4131 310 PANTHER CARBOHYDRATE ESTERASE-RELATED 23 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4131 Lja-Chr1 52466940 52468814 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4131 1 52466940 52468814 Lja1g4131 1 52466940 52468814 ECH
Lja5g3114 5 60862349 60871481 Lja1g4131 1 52466940 52468814 PCT