Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4110 ATGGCGACGAGTTTTGACCGGTGGGAAAAAGATCCTTTCTTTAACGCCGCCGAAGAAGTTCAGGAATCTGCAGACAGGATGGAGTCTGCATATAGGACATGTATTCACGCGAAGAGAGATCCGTCCTGCCCGTGGAACTCTGATGAGCTCCGTCGAGATCTGCATACTGCCCTTGGCACTGCTAAATGGCAGTTAGATGAGTTTGAACGGGCGGTCAGGTCTAGTTATGGAAAAAGCTCTGCGGAGGATGCGAAAATTAGGCACCGGGATTTTATTGTTGCTATTGGTGACAAGATTTCAAAAGTTGAGCATTTTTTACAAGAATCTTCTGTTGGTCCTTTAGGAGGTAGGAAGGCATCTCTGCCTTGGGTGTCTCTGGATCAAGGAGAACGAAACGAGCTTGCGTTGTTTCTTTCTGGAGCCCCAGCAGATGGAGGCAAAAATCAGCCGGCTAAATGTATCAGCAGAGACGGTGAAGATTCCCAGTTAAGTGATAGAGATTCCTCGGAGGAGAAACCACCCGGTCATCGCAGGGCAGCTAGTGCTGATGCTGACATTAGTTCTTGGAAAATTGCTGTTTCGGATGATGTGCAACAATCGACTTCCTCCAATTGTTCTTCTGGTCCGATGCATAAGGTGGCTAGTCTCTCTGGATTTCTTAATTCCGTGGAAACCATCTCTAAGTTGAAGTGGCCTAAGAATGGTAATAGAAAGCTGAAAGCGGTGAATCATTATGATGAAACTGATAAACCACTACTACCTTCAACTCAACTTAATGGGGGTGCCCATGCATGCTACTTGAAAACTAAGAGCAGCATCGATAGTTGTGATGAATGTTATGATAAGCAACTCCAAGGGTGGTATGGGGCTATTCACAGACAGCTTCAAAGATCTCAATACCAAATGCAGTATAATCGGCCTTTTCAAATAACCATATGGATTGTTATTCTCCTTTGCTTGATTGGTAAGCTCCCAATCTTTTATTGGTGCGTCTGA 996 0.4508 MATSFDRWEKDPFFNAAEEVQESADRMESAYRTCIHAKRDPSCPWNSDELRRDLHTALGTAKWQLDEFERAVRSSYGKSSAEDAKIRHRDFIVAIGDKISKVEHFLQESSVGPLGGRKASLPWVSLDQGERNELALFLSGAPADGGKNQPAKCISRDGEDSQLSDRDSSEEKPPGHRRAASADADISSWKIAVSDDVQQSTSSNCSSGPMHKVASLSGFLNSVETISKLKWPKNGNRKLKAVNHYDETDKPLLPSTQLNGGAHACYLKTKSSIDSCDECYDKQLQGWYGAIHRQLQRSQYQMQYNRPFQITIWIVILLCLIGKLPIFYWCV* 332
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4110 331 PANTHER EXPRESSED PROTEIN 1 321 - -
Lja1g4110 331 Gene3D - 9 110 - -
Lja1g4110 331 PANTHER OS05G0443700 PROTEIN 1 321 - -
Lja1g4110 331 MobiDBLite consensus disorder prediction 158 179 - -
Lja1g4110 331 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Lja1g4110 331 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Lja1g4110 331 MobiDBLite consensus disorder prediction 138 183 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja1g4110 Lja-Chr1 52120985 52124166 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4110 1 52120985 52124166 Lja1g4110 1 52120985 52124166 ECH
Lja5g3102 5 60687631 60691029 Lja1g4110 1 52120985 52124166 PCT