Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3606 ATGGAGACATTCAATTCTTCTCAACGAGAGAGCATTGTGTTAGGGCATAACAATCTCCTAATTCGGAGGCCGTCGGAGAGGAATTCCGACGTGGATTTCAACGACGTGTTTGGGGGACCGCCGCGGCGGTCGACGGTTAACAGCGAAGGTGTGAGCGGGGAAGAAGGTGAAGAGAAACCGGTGTTTGGCGGAGAGGATAACGGAAGCAGTAACCGGAGGCGATACTACGCGAGCAAGAGCGATGATTTCTATGACGATATATTCGGAGGAGATGAGTGTCGGAGTGCGTGTTCAACGCCGAAGAGGCGCGATTCTGCTGGTGCTGACCCGTTCAGTTCCGCCGCAGTGTTGAGCCCCGCCGCACTTGAACCTCTTGCTTTTTCTCTCCCTCCAGTTTTCAGCCTTCCTGCCAAATTGACAAAAGGGGTGGATCTTCGAAGATTGGGCTCTCCAACTAGTAGAAACATCAACGATGGTATCACTGCTTCAAATCTATTAGTTTCTCCAGATTCTCATTCCTCTAGAGTTTCAACCGTGGCACCCCAACGCAAGGAGTTGAAAAATGATATAAAACCACCTTACAGGCAAAGTATTCTATCACAGGAGTTTTCAAATCTGAGCACATCTGATAAAGCAGACAAAGGAATTAGCAACATGAAACAAGAAACATCTGTTACTGAAGTTTCTCCTAATACCTTCCATTTCTCAATATACAAATGGGCAAGTAAAGGGGTAGTGCCGGTGGTTATGCCTCTTAGAACAGAAAGAATCTCAAGGATGAAAGATAAGGTTAAACATGAGAGATGCTCAAGCACTGAGGATTGGGTGGTCAGTGACATTACCACAGAAAATGATAATCCTGTACCACATAATGGTTCCTCTTTGACAGAAAACGGAAAACAAAATGTGTCAACTACTTCTGCAACTGATTCAGACCAGATTGTGGAACAGATAGTATCTTCCAATGCTCAACCGGATACATTAAGCAGTGCTCAAACTATTAGTAAAAATGTCACTGAAGCAGAATCAAGTACTCATTCTATGAGTGAGATGAACTACAATGGAAAAACTGAAGCAGGAATTGGAACTCAGAAGCTTGGATCCAAATCTTTACATTCTCTGATCAATCAAAGGGAAGATTATGGTGAGAAGACTAGCAGGGAAAGAGAAGAACACGTGACGAAAAGCACAAAAAAGTTGTCTTCAACTTTTGATGTTACCATGAATCCAAAGAAACCATTAAGAAAGAGTTTCTCCTTGAGAGATGGAGGACATAGTAAAGCTACTTCCCAAGTTTCATCAAGCTTAGGTGAGAATATGGGTAAAGGCCGAGTTAAAGGAAAGGTCAAAGACTTTGTTCAGATTTTCAACCAAGAACCTGTAACAAAACCCAAAGTTGAATCCAAATCTCGATTTCAGAGTTCTTCATACAAGCAGAGACGAGCTTCTCGGACAAACAATAATGTGGAAGATGATCCTGAACAGTCTACGACGGAGAAGTCTGCCACAGATACCGCCAATGTTTCTGCTAATAATTTCTCTCAGCAGGATGATATCTCAGCGTCAGCTATTCCAGACATTTCATTCACTGTTATCGGAGATAAAGACGAGTCCTTCCATGATAATTTCACGATACAAGTATTAGACCAAGATGATGGCGAGGCCTTACAAAACCAAGAAAAACAACAACTCCAAGTGATTGACAACAAGATACAACAATGGTCTAAAGGGAAGGAAGGAAACATGCGCTCGCTGCTATCAACATTACAACACGTGCTTTGGCCGGGGTCTGGCTGGAAGCCTGTGCCACTTGTTGATATAATTGAAGGGAATGCGGTGAAAAGATCTTATCAAAGAGCTTTACTCTGTCTGCATCCAGATAAGTTGCAGCAAAAGGGTGCTACTTCAGACCAAAAATACACTGCAGAAAAAGTTTTTGATATTTTACAGGAAGCTTGGACACAATTCAATAATGTCGGTGCTCTATAA 1989 0.4284 METFNSSQRESIVLGHNNLLIRRPSERNSDVDFNDVFGGPPRRSTVNSEGVSGEEGEEKPVFGGEDNGSSNRRRYYASKSDDFYDDIFGGDECRSACSTPKRRDSAGADPFSSAAVLSPAALEPLAFSLPPVFSLPAKLTKGVDLRRLGSPTSRNINDGITASNLLVSPDSHSSRVSTVAPQRKELKNDIKPPYRQSILSQEFSNLSTSDKADKGISNMKQETSVTEVSPNTFHFSIYKWASKGVVPVVMPLRTERISRMKDKVKHERCSSTEDWVVSDITTENDNPVPHNGSSLTENGKQNVSTTSATDSDQIVEQIVSSNAQPDTLSSAQTISKNVTEAESSTHSMSEMNYNGKTEAGIGTQKLGSKSLHSLINQREDYGEKTSREREEHVTKSTKKLSSTFDVTMNPKKPLRKSFSLRDGGHSKATSQVSSSLGENMGKGRVKGKVKDFVQIFNQEPVTKPKVESKSRFQSSSYKQRRASRTNNNVEDDPEQSTTEKSATDTANVSANNFSQQDDISASAIPDISFTVIGDKDESFHDNFTIQVLDQDDGEALQNQEKQQLQVIDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGATSDQKYTAEKVFDILQEAWTQFNNVGAL* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3606 662 MobiDBLite consensus disorder prediction 163 183 - -
Lja1g3606 662 Gene3D DnaJ domain 557 661 IPR036869 -
Lja1g3606 662 MobiDBLite consensus disorder prediction 379 398 - -
Lja1g3606 662 MobiDBLite consensus disorder prediction 163 181 - -
Lja1g3606 662 PANTHER J DOMAIN-CONTAINING PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1 1 656 - -
Lja1g3606 662 SUPERFAMILY Chaperone J-domain 553 658 IPR036869 -
Lja1g3606 662 MobiDBLite consensus disorder prediction 281 311 - -
Lja1g3606 662 MobiDBLite consensus disorder prediction 423 438 - -
Lja1g3606 662 MobiDBLite consensus disorder prediction 379 443 - -
Lja1g3606 662 MobiDBLite consensus disorder prediction 463 483 - -
Lja1g3606 662 MobiDBLite consensus disorder prediction 24 73 - -
Lja1g3606 662 MobiDBLite consensus disorder prediction 484 498 - -
Lja1g3606 662 MobiDBLite consensus disorder prediction 463 506 - -
Lja1g3606 662 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3606 Lja-Chr1 44774311 44779562 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3606 1 44774311 44779562 Lja1g3606 1 44774311 44779562 ECH
Lja5g3254 5 62842509 62849863 Lja1g3606 1 44774311 44779562 PCT