Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3600 ATGCGCAACGATCGTTGGAGGGATGGAGACAAGGACCAAGGTGATGCTCGGAAAGTGGACCGATGGGCAGAAAACCCATCCGCAAGGCACTTTGGAGAAACACGTCGTGGTACACCTGATAGATGGAATGATTCAGGTAATAGAGACATGAACACTGATCAGAAGCGTGAGAGTAAGTGGAACACGCGCTGGGGTCCAGATGATAAGGAGCTTGAAGCTCATCGTGAAAAATGGAATGACTCTGGTAAAAATGGTGATCAGAGCATGGACAAAGGTTTGTCTCACATTTCCTATCCTAGCAAGGATGAAAAGGAAGGGGATCATTATCGGCCATGGAGGTCTAACTCCTCACTAAGCCGTGGAAGGGTAGAGTCTCCCCATAACCAGAATGTGACACCTAACAAACAAGGGCCTGCATTTTACTCTGGGAGGGGCCGTGGGGAGGATACACCTCCTGTCAATACTCTCGGACGTGCTCGGCTTGGCTCTGGTGGTAGCTCTATAAATAGCACCTATATGCATTCTCAATACCCTGGAACTGTATTGGATAAATTTGAAAGTGAGCATGGAGAAGCTCGTCCCTTTAGATACACTAGGACTAATATGCTTGATGTGTATAGAGTGACTGATGTGCATACAGATAGAAAACTAGTGGATGATTTTCTGCAGGTACCTCCTCTTACGCAGGATGAACTGGTGGAGCCTCTAGCTCTTTGTGAACCAAATTCTGAGGAACTGTCTGTCTTAATGGGCATTGACAAAGGGGAAATATTGAGCAGCAGTGCACCTCAGGTGTCAAAGGATGGACGGAACTCAACAGAATATCCACATTCTAGACGAATGAAGCTTGGAAATGCATCTGTGCAAGATAGAGGTGAAGATGGAGGTTCTTACAAAGTAGCTGATGAGGTGCCAAGTAATAGAGAATCAACCTTTGAAGAAAATAATTCTGTTCATCCTCCTGCTGCATGGCGTGCCACACCCCTGGGTGCACATGCAAGCAATCTCATGCATGATAGCAGAAATGTGCTTGGTGATGTCAGGCCAAGAAACTCAGATGTGAGCTGGTCGCAGCAGCCAAAAGATCCTCGTTCTCAGTGGGACAATAATTTGGAATACTTATCTAGTGAAAATTCCTTTGTTAAGAGGCAACTAACTGGCGTTTTGGACAGTGAACTTGAAACCAGGAGAGTTCCACAGACTTCTCCAGAGGAGTTATCCCTTTTTTATAGAGATCCTCAGGGTCGAGTTCAGGGCCCATTCAAAGGAATTGATATTATTGGATGGTTAGAGGCTGGGTATTTTGGTATTGATTTACCAGTTCGTCTGGAAAGTGCAGCTCCTGACTCACCATGGTTGCAACTTGGTGATGCCATGCCCCATTTACGAGCTAAAGGTGGACCGCCACCTGGGTTTTCTTCAACAAAAGTTGATTCTACAGAGGCACCTGGTTGGCAAAATTCCAGTATCTTCGGAAACATTAATTCTGGTTTGAGTGAGGCTGGGATGTTGAGAAATGATTCCATACATAGACAGAGTTCTGGTACAGAAGCTGAAAATAGGTTTTTGGAGTCACTCATGTCTGGTAGCAAGAGCAGTCCCACACTTGAAAGTCTGACATTGCCAGAAGGTTTACAAGGATTTATGGGAAATAATTCTGGTAATATGGGCCCGTCAGGAGTTGATGGTGGAAGCGATCCTTACTTGCTGGCCAAAAGGCTGGCACTTGAACGACAGAGGTCCTTACCCAATCCTTATCCATATTGGCCAGGGGTAGAAGCTCCATCTCTTCCGCCGAAATCAGACATTGTTCCAGATGCATCACAACATTCAAAACTCTTGCCTTCGTTGAGTGACAATTCTCGTCAGTTTCAGTCCCAAAATTCTGAGTTGTTCTCAATCATCCAAGGATTATCCGACAGGGCATCCACTGGTTTGAATAATGGTGTTCCTGGATGGACAAATTATCCCATACAAGGTGGATTGAATCCCTTTCAGAATAAGATTGACTTGCATCATGATCAGAATTTTCTTCAAATGCCATTTGGAATTCATCAACAAAGGTTGCAAGCACCAAACCAATTGCCTTTAAATAACTTCATTTCACAAACTGCAGATAATCCATCTAGCATTTTGGCAGCAGAGAAATTACTTTCTTCCGGTTTATCGCAAGATCCCCAAATGGTAAATATGTTGCAACAGCAATACTTGCTGCAGTTGCATTCTCAGGCAACTGCTCCTACGCAGCAGATGCCTATGTTAGATAAACTTCTATTACTGAAGCAGCAACAGCAGCAGGAGGAGCAACAGTTGTTACTACGTCAACAACAGCAACTGCTTTCTCAAGTGCTTCAAGACCATCAGTCTCACCAGCGCCTTGGCAATTTATCTTATGGACAGCTGCAGGGAGGTGGAATACCAGGGGGGAATTTGCATGGGATTTCTTCTCAATTTCAACCACCTCAACAAATTTTTCCGATGAGCTCTCAGACTCCGATTCACAATGTGCATGATGAGCGTAATAATGGTTCTTTGAATTCACCTCTGCAAGTAAGTCAGGACACTGGCTATAATATAAACAGCGAATCTTCTGTGCAGCTGCAACACCAATTATTCGGCAATCATCAGAATAACTGGGTCCCTGCTATTCCTGAGCAAATTAATGAAAAGTACCAGGAAACATTGCCTGCATCAGCTTCTGTTGAAAGTTCCCTATTGCATGAGCAGAATAGAACAGAAGAGGAACCTGACATTGCACAGAAACCTCTTTCTGTTTTTGACTGTGCTGCTAAATCTGCAGAGCAGATGCCAGACAACAATTGTACGTCTGGTAGTACTCTTGTGAGTACAATTTCTGAGTCTGGTGAGCATTCTCAGGCTGTGCAATGTGCTGAACCTGCGGTTGCTGTGTCTGCTGCTGAATATTGTGAGATTCAGTTACCACTAGCAAGTCATCTTGGTAAGGATGCGGGGATCAATTCTGATAGTATTGAAGAGCAGCAGGCTGGAAGAGACAGCTCAAATGTTGAGCCCCCTGTAGTGGATGTAAAAAATGTTGAAGCACTTGTACCTAAGAAGGCTAATGAAAAAAAATCTAAGAAGCAAAAATCTTCCAAATCCCAGTCTTCCGATCAAACAAAGGGATTGCTAAAAAATGTGACTCTGCAGCAGCCAAAGAAGTCAGAAGCTGAAAATGCAAATTATAGTGAAAGCAATTTAAAGGAAGTCGGCAAGGTTGAAGCAGCTAAGGGAACAAGAAGTAAAGATAGTCAATCTGGAGTTGCTACCTCTGAGGCAGCTGATCATCAAGTAGTTGGTGGTCTCCCTGCTAATATTTCACGAAGCATCACTGAAACTGTCATTGAGAGTGATCTGAAGGCAGGAAGTTCTTTTGCCACACATAATAATGAATTACCTTCAGGGAGAGCTTGGAAACCTGCTCCTGGTTTCAAGGCGAAGTCTTTATTAGAAATTCAACAGGAAGAGCAAAAAAAGGCACAGATGGAGATGCCTGTTGCCGAGGTTACTGCTTCTGTCAATTCCCTGAATTTGACAACTCCCTGGGTTGGCGGTGTGGCTAATCCAGACTCTTCAAAGGTTTCTGTTGAAACTTACAGAGAATATCTGGCTAAACCTGAAACTCCTCAAAATAGCAAAAGCAAGAAAAGCCAATTACATGATCTATTGGCAGAAGATGTAAAAAAATCTAGTGAAAGAGATGGTGAGGTTCCAGACATTTTACTGTCCTCACAATATATAGCTGTCCATTCAGAACCAATAGATGAAGGAGACTTCATTGAAGCTAAAGACACTAAAAGAAGCCGGAAAAAGTCTTCAAAATCAAAGGGTTCAGGGTCTAAGGTCTCACTGCCAGTTGCTGCTTCTAAAGTGCCGATAAGTTCAAGTCCCATTGAAAAGGGAAAAAGCTCCCGCAATTTGCTGCAGGAGAAAGAACAACTGCCTGCCATACCTTCTGGACCCTCTCTTGGAGATTTTGTTCTATGGAAAGGAGAACCAACAAGCCCATCTCCTTCTCCTGCATGGAGTACTGATTCTGCTAAGATTTCTAAACCCTTGTCATTAAGGGACATTCTAAAGGAGCAGGAGAAAAAGTCTTCTTCTGCAGTCCCCCCAAGCCAAGTGTCTACCCTTCAGAAAATACAGCCTGCCCAAGCTGCTCGGAGTAGTGGTCCTTCATGGACAGTTTCAGCTTCATCTCCGTCGAAAGCTGCACCTTCTGGCCAGATAAACTCCCAAGCTTCTCAATCAAAACACAAAGGGGATGATGACTTATTCTGGGGTCCAGTTGAGCAATCCAAGCTAGAAAATAAGCAGTCAGGTTTCCCTCAACTTGCAAGCCAGGGGAGCTGGGGTTCCAAGAATGTTCCTGTGAAAGGTAATTCACCGGGACCACTAAATCGACAAAAATCAGGGAGTAGTAAACTAACAGAGCAGTCTCTATCAGCATCACCTGCCTCTTCTCAATCATTGCTGAAATCAAAAAAAGATGCCATGACTAAGAATTCTGAAGCCATGGACTTCAGAGTTTGGTGTGAGAATGAGTGTGTCAGGCTTATTGGGACGAAAGATACAAGTTTCCTTGAGTTTTGCTTGAAGCAATCCAGATCTGAAGCGGAGATGTTTCTGATAGAAAACCTCGGAACATATGATCCTGATCATGAATTCATTGAAAAATTCCTCAACTACATGGAGTTACTACCACCAGATGTTTTGAAAATCGCTTTTCAGACACAGAATGATGGAGAAGTAGCTGGAGGCATGATATCTGGAAATGCAGATTTACGCGCTATGGGACACACTGAGGTATCTGTGTCAAAAGGTGGAAAGAAGGGTAAGAAAGGGAAAAAGGTTAGTGCTGCAGTTTTGGGATTCAATGTCGTAAGTAACCGGATCATGATGGGTGAGATCCAGACAGTAGAAGACTAA 4947 0.4384 MRNDRWRDGDKDQGDARKVDRWAENPSARHFGETRRGTPDRWNDSGNRDMNTDQKRESKWNTRWGPDDKELEAHREKWNDSGKNGDQSMDKGLSHISYPSKDEKEGDHYRPWRSNSSLSRGRVESPHNQNVTPNKQGPAFYSGRGRGEDTPPVNTLGRARLGSGGSSINSTYMHSQYPGTVLDKFESEHGEARPFRYTRTNMLDVYRVTDVHTDRKLVDDFLQVPPLTQDELVEPLALCEPNSEELSVLMGIDKGEILSSSAPQVSKDGRNSTEYPHSRRMKLGNASVQDRGEDGGSYKVADEVPSNRESTFEENNSVHPPAAWRATPLGAHASNLMHDSRNVLGDVRPRNSDVSWSQQPKDPRSQWDNNLEYLSSENSFVKRQLTGVLDSELETRRVPQTSPEELSLFYRDPQGRVQGPFKGIDIIGWLEAGYFGIDLPVRLESAAPDSPWLQLGDAMPHLRAKGGPPPGFSSTKVDSTEAPGWQNSSIFGNINSGLSEAGMLRNDSIHRQSSGTEAENRFLESLMSGSKSSPTLESLTLPEGLQGFMGNNSGNMGPSGVDGGSDPYLLAKRLALERQRSLPNPYPYWPGVEAPSLPPKSDIVPDASQHSKLLPSLSDNSRQFQSQNSELFSIIQGLSDRASTGLNNGVPGWTNYPIQGGLNPFQNKIDLHHDQNFLQMPFGIHQQRLQAPNQLPLNNFISQTADNPSSILAAEKLLSSGLSQDPQMVNMLQQQYLLQLHSQATAPTQQMPMLDKLLLLKQQQQQEEQQLLLRQQQQLLSQVLQDHQSHQRLGNLSYGQLQGGGIPGGNLHGISSQFQPPQQIFPMSSQTPIHNVHDERNNGSLNSPLQVSQDTGYNINSESSVQLQHQLFGNHQNNWVPAIPEQINEKYQETLPASASVESSLLHEQNRTEEEPDIAQKPLSVFDCAAKSAEQMPDNNCTSGSTLVSTISESGEHSQAVQCAEPAVAVSAAEYCEIQLPLASHLGKDAGINSDSIEEQQAGRDSSNVEPPVVDVKNVEALVPKKANEKKSKKQKSSKSQSSDQTKGLLKNVTLQQPKKSEAENANYSESNLKEVGKVEAAKGTRSKDSQSGVATSEAADHQVVGGLPANISRSITETVIESDLKAGSSFATHNNELPSGRAWKPAPGFKAKSLLEIQQEEQKKAQMEMPVAEVTASVNSLNLTTPWVGGVANPDSSKVSVETYREYLAKPETPQNSKSKKSQLHDLLAEDVKKSSERDGEVPDILLSSQYIAVHSEPIDEGDFIEAKDTKRSRKKSSKSKGSGSKVSLPVAASKVPISSSPIEKGKSSRNLLQEKEQLPAIPSGPSLGDFVLWKGEPTSPSPSPAWSTDSAKISKPLSLRDILKEQEKKSSSAVPPSQVSTLQKIQPAQAARSSGPSWTVSASSPSKAAPSGQINSQASQSKHKGDDDLFWGPVEQSKLENKQSGFPQLASQGSWGSKNVPVKGNSPGPLNRQKSGSSKLTEQSLSASPASSQSLLKSKKDAMTKNSEAMDFRVWCENECVRLIGTKDTSFLEFCLKQSRSEAEMFLIENLGTYDPDHEFIEKFLNYMELLPPDVLKIAFQTQNDGEVAGGMISGNADLRAMGHTEVSVSKGGKKGKKGKKVSAAVLGFNVVSNRIMMGEIQTVED* 1649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1 170 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1209 1242 - -
Lja1g3600 1648 Pfam GYF domain 409 446 IPR003169 GO:0005515
Lja1g3600 1648 Gene3D - 393 468 IPR035445 -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 468 488 - -
Lja1g3600 1648 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1648 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1372 1422 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 997 1108 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 259 322 - -
Lja1g3600 1648 SUPERFAMILY GYF domain 397 461 IPR035445 -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 343 368 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 351 368 - -
Lja1g3600 1648 CDD GYF 405 462 IPR003169 GO:0005515
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1 84 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1041 1072 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1439 1502 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 898 918 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1263 1504 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1224 1242 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 96 111 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1022 1040 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 1342 1356 - -
Lja1g3600 1648 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1648 - -
Lja1g3600 1648 SMART gyf_5 406 461 IPR003169 GO:0005515
Lja1g3600 1648 ProSiteProfiles GYF domain profile. 405 456 IPR003169 GO:0005515
Lja1g3600 1648 MobiDBLite consensus disorder prediction 112 137 - -
Lja1g3600 1648 MobiDBLite consensus disorder prediction 473 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3600 Lja-Chr1 44737220 44745874 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3600 1 44737220 44745874 Lja1g3600 1 44737220 44745874 ECH
Lja5g3230 5 62598244 62607391 Lja1g3600 1 44737220 44745874 PCT