Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3581 ATGGGAGCGGAAACGCCGTGTGATGGTGAAGACGCCGCCGCTCCCTTCGTTCTGGGACTCCAACCATCTGCACTCGTTGACAACGTCGCTCGCGTCGATTCCTCCTTCCTCGATCGAATCCCCGGCGAACGCGGTGGCTCCATTCCCGTTGCGATTGAAGAACTCGATTTCATACTGAGCGAGGTTAAATCTATAGTACCTAATGACGACGCTGAATCTTATTCTTCGATGACGAAATTGAAGACTCTGGCTGGTGGTAGTGTTGCCAATACGATTCGAGGACTGAGCAGTGGTTTTGGAATTTCCAGTGGAATTATTGGGGCTTGTGGTGATGATGAGCAAGGTTACTTGTTTGTTGATAACATGTCCTCCAATGCTGTTGACCTCTCCAGAATTCGTAAGAAGAAAGGACACACTGCACAGTGTGTTTGCTTGGTTGATGCCTTTGGTAACCGTACTATGCGGCCCTGTCTCTCAAATGCTGTCAAAGTTCAGGCAGAAGAATTGAAGAAAGAGGATTTCAAGGGCTCCAAGTGGTTGGTGTTGAGATACGCGATACTGAATTTGGAAGTTATTCAAGCAGCTATTCTTTTAGCCAAGCAGGAAGGGCTTCTTGTTTCCTTGGATCTGGCCAGCTTTGAGATGGTCAGGAACTTTAAACTACCACTCATGAAGTTACTGGAATCTGGGAACATAGACCTCTGCTTTGCCAACGAGGATGAGGCAGCTGAACTTATAAGGGGCGAACAGAATGCTGATCCAATAGCTGCAGTAGAGTTTCTTGCCAAATACTGTCAATGGGCTGTGGTAACATTAGGCTCTGATGGATGCATTGCTAAACATGGGAAGGAGATGATCCGGGTTCCGGCCATAGGCGAAGCAAAAGCAACTGATGCTACCGGAGCAGGGGACCTTTTTGCAAGTGGATTCTTGTATGGATTGGTCAAGGGTTTGTCACTAGAAGAATGCTGCAAAATAGGCACATGCAGTGGTGGATCTGTTGTCCGATCTCTTGGCGGTGAGGTGACAGTAGAGAATAGGCAATGGATGTACAAGCAGATGCAGCTAAAGGGTCTTCCCCCGCCTGATGATATGTGCAAATGA 1104 0.4783 MGAETPCDGEDAAAPFVLGLQPSALVDNVARVDSSFLDRIPGERGGSIPVAIEELDFILSEVKSIVPNDDAESYSSMTKLKTLAGGSVANTIRGLSSGFGISSGIIGACGDDEQGYLFVDNMSSNAVDLSRIRKKKGHTAQCVCLVDAFGNRTMRPCLSNAVKVQAEELKKEDFKGSKWLVLRYAILNLEVIQAAILLAKQEGLLVSLDLASFEMVRNFKLPLMKLLESGNIDLCFANEDEAAELIRGEQNADPIAAVEFLAKYCQWAVVTLGSDGCIAKHGKEMIRVPAIGEAKATDATGAGDLFASGFLYGLVKGLSLEECCKIGTCSGGSVVRSLGGEVTVENRQWMYKQMQLKGLPPPDDMCK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3581 367 PANTHER CARBOHYDRATE KINASE-LIKE 10 357 - -
Lja1g3581 367 PANTHER SUGAR KINASE 10 357 - -
Lja1g3581 367 SUPERFAMILY Ribokinase-like 23 340 IPR029056 -
Lja1g3581 367 Gene3D - 21 348 IPR029056 -
Lja1g3581 367 CDD adenosine_kinase 15 339 - -
Lja1g3581 367 Pfam pfkB family carbohydrate kinase 75 340 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3581 Lja-Chr1 44573131 44577395 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3581 1 44573131 44577395 Lja1g3581 1 44573131 44577395 ECH
Lja5g3252 5 62826719 62830368 Lja1g3581 1 44573131 44577395 PCT