Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3546 ATGGCTGATTCTGCAGGCTCAGCCTCTTCCGGCAGAATGTGGTGCTCTGTCCCTGAACGGCTTCAGCTGCATGGAGCCATGCTGGCCCTGCAATTTGGCTATGCTGGCTTCCATGTTGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACAGAAACATCATTGCTTTACTTCTTCTCCTTCCTTTTGCTTACTTCTTGGAAAAGAAAGAGAGGCCTGCAATCACTTTAAACTTCCTCTTCCAGTTCTTTCTTCTGGCCCTTGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGGTTGGACAACACATCCCCAACCTTTGCATCGGCCATACAGAACTCTGTCCCAGCCATCACATTTCTCATGGCAGCTATACTCAGGATAGAGCAAGTGCGGTTAAACCGAAAAGATGGGATAGCCAAGGTGGCGGGAACGGTGTTCTGTGTTATCGGGGCAAGTGTGATCACACTCTACAAGGGTCCAACCATATACAGCCCGGTTCCACCTCTCAACAGCATCATCACCCCACATCCACAGACACAGTTACTTGGCTCAGTCTCACTCTCACTAGGAGATGCTAATGGCAAAAATTGGACCCTTGGATGCCTCTACCTCATCGGACACTGCTTGTCGTGGTCCGGTTGGCTTGTCCTGCAAGCGCCCATCCTTAAGAAGTACCCGGCACGCCTCTCTGTCACTTCCTATACATGTTTCTTTGGACTCATCCAATTCCTTGTTATTGCTTTGATTGTTGAAAGAGATGCTCAAGCTTGGATCTTCCATTCTGGTGGAGAAGTTTTCACTATTTTGTATGCGGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTGGCGGTGTATCAACCTGTTCAGACTCTTGTTGTCGCTATTATGGCTTCCCTTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAATATTGATCGTTGTGGGACTATACCTAGTCTTGTGGGGTAAAAACGCAGAGAGGAAGTTTGCTATGGAACATGCAGCGATCATGTCCACTCCGGAGCATAGCAGCATCAGATCCGCAAGTCATGCCAAAACATCACTTACTCAGCCTCTTCTCCCTTCATCAACGGAAAATGTCTAA 1182 0.4839 MADSAGSASSGRMWCSVPERLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITLNFLFQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGIAKVAGTVFCVIGASVITLYKGPTIYSPVPPLNSIITPHPQTQLLGSVSLSLGDANGKNWTLGCLYLIGHCLSWSGWLVLQAPILKKYPARLSVTSYTCFFGLIQFLVIALIVERDAQAWIFHSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAILIVVGLYLVLWGKNAERKFAMEHAAIMSTPEHSSIRSASHAKTSLTQPLLPSSTENV* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3546 393 Pfam EamA-like transporter family 28 164 IPR000620 GO:0016020|GO:0016021
Lja1g3546 393 Pfam EamA-like transporter family 208 346 IPR000620 GO:0016020|GO:0016021
Lja1g3546 393 PANTHER WAT1-RELATED PROTEIN 15 370 IPR030184 GO:0016021|GO:0022857
Lja1g3546 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 167 - -
Lja1g3546 393 PANTHER WAT1-RELATED PROTEIN 15 370 - -
Lja1g3546 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3546 Lja-Chr1 44141697 44145866 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3546 1 44141697 44145866 Lja1g3546 1 44141697 44145866 ECH
Lja5g3285 5 63303946 63308949 Lja1g3546 1 44141697 44145866 PCT