Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3532 ATGGCGGCGGCGGAAGAGATCAGCAAAAACGACAACGCCGGATTATCATCTTCCAAAACCAAAAGCTTCTGGTCATGGCCTTCTTCTCTCCGTTGGATTCCAACTTCCACTGATCTTGTCATCGCTGCCGAGAAGCGCCTTCTTTCCATTATCAAGACTGGGTATGTTCAAGAGCGTGTTAATATAGGTTCTGGTCCTCCGGGGTCTAAAGTTAGATGGTTCGGTTCATCGAGCAATGAGCCGCGGTTTATTAACACATTTACATTTGATAGTAAACCTGATGCTCCCACGCTTGTAATGGTTCATGGATATGCTGCTTCTCAGGGATTCTTTTTTCGTAATTTCGATGCGCTTGCTGCTCGTTTCAGAGTCATTGCTGTTGATCAACTCGGGTGGGGTGGATCAAGCAGGCCTGATTTTACATGCAAAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCAAAAAACCTGACCAATTTCATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCCAAATATGCGCTCAAGCACCCAGAGCATGTACAACACTTAATTTTGGTAGGGCCTGCTGGATTTACTACAGAATCAGATAAAGCCACCGAGTTTATTACAAAGTTTCGAAAAACATGGAAGGGAGCAGTAATGAACCATCTATGGGAATCTAATTTTACACCATTAAAAATTGTCAGAGGTATTGGTCCTTTGGGTCCTACCATGGTTCGCAAGTATACGAGTGCTAGGTTTGGTACACATTCAACCGGGGAGGTACTGACTGAAGAGGAATCAAAATTGCTGACAGATTATGTTTACCATACATTAGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAATATATTTTTTCATTTGGAGCATTTGCTAGGATGCCCCTTCTTCTCAGTGCCTCAGAGTGGAAGGTGCCCACCACTTTCATATATGGTTTCCAAGACTGGATGAATTATGAGGGTGCCCAAGAAACTCGCAAGAATATGACGGTTCCATGTGAAATCATCAGGGTACCTCAGGCTGGGCACTTTGTGTTCATTGATAACCCATCTGGCTTCCATTCATCTGTGTTTTATGCATGTAGAAGGTTTTTTACACCAGATCCAGACAGTGAATCTCTTCCTGAAGGGCTAACCTCTGCATAG 1179 0.4377 MAAAEEISKNDNAGLSSSKTKSFWSWPSSLRWIPTSTDLVIAAEKRLLSIIKTGYVQERVNIGSGPPGSKVRWFGSSSNEPRFINTFTFDSKPDAPTLVMVHGYAASQGFFFRNFDALAARFRVIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLTNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFTTESDKATEFITKFRKTWKGAVMNHLWESNFTPLKIVRGIGPLGPTMVRKYTSARFGTHSTGEVLTEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARMPLLLSASEWKVPTTFIYGFQDWMNYEGAQETRKNMTVPCEIIRVPQAGHFVFIDNPSGFHSSVFYACRRFFTPDPDSESLPEGLTSA* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3532 392 PRINTS Epoxide hydrolase signature 121 136 IPR000639 GO:0003824
Lja1g3532 392 PRINTS Epoxide hydrolase signature 184 197 IPR000639 GO:0003824
Lja1g3532 392 PRINTS Epoxide hydrolase signature 316 332 IPR000639 GO:0003824
Lja1g3532 392 PRINTS Epoxide hydrolase signature 349 371 IPR000639 GO:0003824
Lja1g3532 392 Pfam alpha/beta hydrolase fold 96 361 IPR000073 -
Lja1g3532 392 Gene3D alpha/beta hydrolase 83 369 IPR029058 -
Lja1g3532 392 PRINTS Alpha/beta hydrolase fold signature 121 136 IPR000073 -
Lja1g3532 392 PRINTS Alpha/beta hydrolase fold signature 170 183 IPR000073 -
Lja1g3532 392 PRINTS Alpha/beta hydrolase fold signature 184 197 IPR000073 -
Lja1g3532 392 SUPERFAMILY alpha/beta-Hydrolases 87 366 IPR029058 -
Lja1g3532 392 PANTHER RE40534P-RELATED 16 379 - -
Lja1g3532 392 PANTHER BNAA01G13630D PROTEIN 16 379 - -
Lja1g3532 392 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3532 Lja-Chr1 44013103 44017824 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3532 1 44013103 44017824 Lja1g3532 1 44013103 44017824 ECH
Lja5g3292 5 63430408 63434850 Lja1g3532 1 44013103 44017824 PCT