Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3485 ATGGCTATGTTTGTGAAGCTCCCTGGTGTTTCTCCAACTACCTTAATACTCCATTTCATATTGTTGTTAGTTTTAACATCCAGAACGAAGGCTGTGGTGAAGCTGCCACCAAATGTTGAAGTTCCTGCAGTGATGGCTTTCGGCGACTCAATTGTAGACCCCGGAAACAACAACAAGATTAAAACACTGGTCAAATGCAATTTTCCTCCTTATGGTAAAGATTTTGAGGGAGGAAACCCAACTGGTAGATTCTGCAATGGAAAAATTCCATCAGACTTGCTTGCTGAAGAATTGGGTATCAAGGAGCTTTTACCAGCTTATAAGCAACCAAATCTCAAACCAAGTGATCTTCTGACTGGAGTAAGCTTTGCTTCAGGTGCCTCTGGATATGATCCTCTAACGCCAAAAATAGCGTCAGTGATATCAATGTCCGATCAACTTGATATGTTCAAAGAATACATAGGGAAGCTTAAGAACATTGTTGGAGAGAACAGAACAAACTACATCATAGCCAACAGTCTAATGCTTGTGGTAGCTGGAAGTGATGACATTGCCAACACCTATTTTATTGCTCGTGTAAGGCAATTACATTATGATGTTCCTGCTTACACTGACCTCATGGTCAACTCAGCCTCTCAATTTGTAAAGGAATTGTATATACTTGGAGCTCGTAGAATCGGAGTTATAAGTGCACCTCCGATTGGGTGTGTGCCATCACAGAGGACTCTAGCTGGAGGTATACACAGAGAGTGCTCAGGGAAATACAATGATGCAGCCAAATTATTCAACTCCAAACTCTCAAAGGAATTGGACTCGCTTCACCACAACTCGCCCAATAGTAGAATCGTTTACATTGACATTTACAACCCTCTACTTGATATCATTGTAAATTATCAAAAATATGGCTTTAAAGTTGCGGATAAAGGTTGCTGTGGCACAGGACTACTAGAAGTATCAATTTTATGCAACCCTTTAGGTGATTCTTGTTCCGATGCTTCACAATACGTTTTTTGGGATAGTTATCATCCCACCGAAGTTGTGTATAGAAAGCTCATAGACCAAGTCCTGCAAAAATATTTGAATCGGCTTTTCTGA 1095 0.4055 MAMFVKLPGVSPTTLILHFILLLVLTSRTKAVVKLPPNVEVPAVMAFGDSIVDPGNNNKIKTLVKCNFPPYGKDFEGGNPTGRFCNGKIPSDLLAEELGIKELLPAYKQPNLKPSDLLTGVSFASGASGYDPLTPKIASVISMSDQLDMFKEYIGKLKNIVGENRTNYIIANSLMLVVAGSDDIANTYFIARVRQLHYDVPAYTDLMVNSASQFVKELYILGARRIGVISAPPIGCVPSQRTLAGGIHRECSGKYNDAAKLFNSKLSKELDSLHHNSPNSRIVYIDIYNPLLDIIVNYQKYGFKVADKGCCGTGLLEVSILCNPLGDSCSDASQYVFWDSYHPTEVVYRKLIDQVLQKYLNRLF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3485 364 CDD SGNH_plant_lipase_like 42 359 IPR035669 -
Lja1g3485 364 Gene3D SGNH hydrolase 34 360 IPR036514 -
Lja1g3485 364 PANTHER GDSL ESTERASE/LIPASE EXL3 12 363 - -
Lja1g3485 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 363 - -
Lja1g3485 364 Pfam GDSL-like Lipase/Acylhydrolase 44 354 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3485 Lja-Chr1 43452276 43457204 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3485 1 43452276 43457204 Lja1g3485 1 43452276 43457204 ECH
Lja5g3337 5 64823405 64848621 Lja1g3485 1 43452276 43457204 PCT
Lja1g3485 1 43452276 43457204 Lja5g3336 5 64802783 64808999 PCT