Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2732 ATGGATCACAAGCTAGTCTCAAGCTGGTATCATCTTCATTCCACGGTGCCCTTGTCTTATGTTCAACCACCGGAAAGTAGGCCAGGCACGGTCACTGTTGCTTCCGGCAAGGCGGTCCCGGTGGTGGATCTCGGTGGACATGATCGTGCTGAAACCTTGAAGCAGATTTTTAGAGCTTCCGAGGAATATGGATTTTTCCAGGTTATCAACCATGGAGTTTCCAATGAGTTAATCGAGGATACACTAAATATTTTCAAGGAATTTCACGCCATGCCAGCTGAAGAAAAATTAAGTGAAAGTTCAAGGGATCCAAATGGAAGCTGCATGCTCTATACAAGCCGTGAGATTAACAACAAAGATTGCATTCAGTTTTGGAAGGACACATTAAGACACCCATGCACACCTTCTGAAGAATTCATGGAGTTTTGGCCTCTGAAGCCTGCAAGATACCGAGAAGTAGTTGAGAAATATACAAAGGAACTGAGAGAACTAGGATCCCAAATTTTGGAGATGCTATGTGAAGGGTTAGGACTTGATCCAAGATATTGTTGTGCTGGACTTAGTGAAAATCCATTATTGCTGTCAAATCACTATCCACCCTGCCCAGAACCGAGTTTAACATTAGGGTTATCTAAGCATCGAGATCCTACTCTTGTTACCATTCTGCTTCAAGATACAGATGTAAATGCACTCCAAGTTTTCAAGGATGGGGAATGGATTTCTATTGAGCCAATTCCCTATGCATTTGTAGTCAACATTGGGCTTCTCTTGCAGATAATTAGCAATGGAAGGCTCGTTGGAGTTGAACATCGTGTTGTCACAAATTCAAGTATTTCGAGGACCACCGTTGCCTATTTCATTCGCCCAAAGAAAGAAGAGATTGTAGAACCTGCAAAGGCATTGGTAAGAACCGGTGCTCATCCCATCTATAGGTCCATTGCATTTGAAGAGTTTTTGAGAATTTTCAAGACCAGAGATCCTGCCATTGAACCAAAATTGGTCTTATAA 1008 0.4246 MDHKLVSSWYHLHSTVPLSYVQPPESRPGTVTVASGKAVPVVDLGGHDRAETLKQIFRASEEYGFFQVINHGVSNELIEDTLNIFKEFHAMPAEEKLSESSRDPNGSCMLYTSREINNKDCIQFWKDTLRHPCTPSEEFMEFWPLKPARYREVVEKYTKELRELGSQILEMLCEGLGLDPRYCCAGLSENPLLLSNHYPPCPEPSLTLGLSKHRDPTLVTILLQDTDVNALQVFKDGEWISIEPIPYAFVVNIGLLLQIISNGRLVGVEHRVVTNSSISRTTVAYFIRPKKEEIVEPAKALVRTGAHPIYRSIAFEEFLRIFKTRDPAIEPKLVL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2732 335 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 289 IPR005123 -
Lja1g2732 335 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 2 332 - -
Lja1g2732 335 Pfam 2OG-Fe(II) oxygenase superfamily 191 289 IPR044861 -
Lja1g2732 335 Coils Coil 154 174 - -
Lja1g2732 335 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 332 - -
Lja1g2732 335 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 136 IPR026992 -
Lja1g2732 335 SUPERFAMILY Clavaminate synthase-like 12 322 - -
Lja1g2732 335 Gene3D - 4 326 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2732 Lja-Chr1 32616320 32622125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2732 16 318 Glycosyltransferase AT5G59530 31.579 4.80e-45 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3213 2 69627136 69629392 Lja1g2732 1 32616320 32622125 PCT