Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2507 ATGGCCTGGTGGAATTTAAGACCCCTCTTTCGTTCTCAAACTATCAGGAACCCTTTTCAGGATTTCAGGATGAGGGAAGTCCAACTTGGTTCACATACTATGACTTCTCATGGATATGCACTTGCAAGAACCCACATGCATGATTGGATCATACTATTGCTCCTTGTGGTGATTGAAATCGTCTTGTACATGATCCATCCATTCTATCGCTTTGTTGGGAAGGATATGATGACTGATCTCAGATATCCCCTGAAGAGTAATACAGTTCCTGTTTGGTCTGTTCCAATCTATGCAGTTTTGTTGCCTGTGGTGATCTTTCTTGTTGTCTATATCCGAAGGAGAGATATCTATGATCTTCATCATGCCATTCTGGGTCTATTGTTCTCCATCTTAGTAACAGCAGTACTTACTGATGCAATCAAAGATGCAGTAGGTCGACCTCGACCTGACTTCTTCTGGCGATGTTTTCCGGATGGAAAGGATGTTTATGATGCATTGGGAAATGTTGTTTGTCATGGTGACAAGGATGTTATAAAGGAAGGACATAAGAGTTTCCCAAGTGGCCATACTGCATGGTCCTTTGCTGGTCTGGGGTTTTTATCACTGTACTTATCTGGAAAAATAAAAGTATTTGATCAAAAAGGCCATATTGCAAAACTTTGCATTGTTGTTCTACCACTACTTTTTGCATCACTTGTCGGCATTTCTCGAGTCGATGACTACTGGCACCACTGGCAGGACGTGTTTGCTGGAGGTCTTTTGGGGCTTGTAATGGCCACATTTTGCTATTTGCAGTTTTTTCCTCCTCCTTATCACCCTGAAGGTTGGGGTCCTTATGCTTATTTTAGGATGCTGGAAGAATCACGAGGGATGACACAACAAGCTGCTAATGGTGAAAGTTCTAGCGAAGCGCAGTTAAGAGAAGCTCAGGACCAGGAGGGACAAGGTTTCCATGGATGTATGGGGATAACTTTAGCACGGGATCAAGGTGGTGAAACATTGGATGAAATTGAAGCTGGGAGGAGACAAAACCCTTACACATCATGA 1047 0.4298 MAWWNLRPLFRSQTIRNPFQDFRMREVQLGSHTMTSHGYALARTHMHDWIILLLLVVIEIVLYMIHPFYRFVGKDMMTDLRYPLKSNTVPVWSVPIYAVLLPVVIFLVVYIRRRDIYDLHHAILGLLFSILVTAVLTDAIKDAVGRPRPDFFWRCFPDGKDVYDALGNVVCHGDKDVIKEGHKSFPSGHTAWSFAGLGFLSLYLSGKIKVFDQKGHIAKLCIVVLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVMATFCYLQFFPPPYHPEGWGPYAYFRMLEESRGMTQQAANGESSSEAQLREAQDQEGQGFHGCMGITLARDQGGETLDEIEAGRRQNPYTS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2507 348 PANTHER LIPID PHOSPHATE PHOSPHATASE 17 340 IPR043216 GO:0006644
Lja1g2507 348 MobiDBLite consensus disorder prediction 328 348 - -
Lja1g2507 348 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 17 340 - -
Lja1g2507 348 Pfam PAP2 superfamily 123 267 IPR000326 -
Lja1g2507 348 MobiDBLite consensus disorder prediction 292 316 - -
Lja1g2507 348 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 43 275 - -
Lja1g2507 348 MobiDBLite consensus disorder prediction 292 309 - -
Lja1g2507 348 CDD PAP2_containing_1_like 78 266 - -
Lja1g2507 348 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 44 273 IPR036938 -
Lja1g2507 348 SMART acid_phosph_2 121 263 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2507 Lja-Chr1 29062282 29066700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2507 24 341 Lipid Metabolism Gene Families AT3G02600 71.787 7.04e-176 489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2507 1 29062282 29066700 Lja1g2507 1 29062282 29066700 ECH
Lja2g1477 2 14270097 14276527 Lja1g2507 1 29062282 29066700 ECH
Lja5g0318 5 2814345 2818756 Lja1g2507 1 29062282 29066700 ECH