Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1326 ATGATCCAAGAACTGTTGGGTGGTTCTTCTGGATTTTTATCTTCGGGAGATAGGAAAATCTCCGTAAACTCAGCTTCTGTTTTTGCACCTCCGCCCATACCATCTCCTTCTCTGCCTTCTTCTGCCGCCGCCACCACCTCTGGTGGTGGTGGTGCTGGTAATACCGCAGCTGCCACCTCGTCGAATTCCGAGAACCAGAACTTGAGGTGCCCACGATGCGATTCATCAAACACGAAATTTTGTTACTACAACAACTACAATCTCACCCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGAGGTTCTCTGAGAAACGTTCCAATCGGAGGTGGTTGCCGGAAAAACAAGACCGTCAGCGCGTCGTCCAACTCCGTGGCGGCAGGTAAGGCTAGTGTGGGTGTGGCTAAGATGAAAACGGCTGCGTCTGAGCTTGGAAGTAGGTCAGGACTTGGTGCCGGCGTCTTCGATCATCAGGAGCTTCCGGCAAGCCCAATTTTGTGGGGTTCGCCGCAAAATTCTCATGTGCTGGCTTTGCTGAGAGCTAGCCAGAACCATCACCCTAACCCTACCTCTTGTCCGAACAATCTCATACCTAATATTGGTGTGACTCTGAAGGAAGAAGGGAACTTGATGAGATCCCACATGGTGACTGAACCAATGGGCTCTAATGGCCTTCTGAATAATGTTCCTCCAACCTCAAGCTTTGATCCTTCACTTGGTCTCACGAGCTCTTTCTGGAGAAACAACAATCTCGATCATCAGCCAGCAGCTCATCATCAATCACAAAATGGAGGATTCGTGTTCGGCGAGCACCAAAACAGTGGGATCCAAGAACTCTACCAGAGACTCAGGTCTTCATCTTCTTCAGCTAACTATTGCAGTGACGACTCATCATCATCGTTGTTTCTAAGCAACAACATGGCTTCTTCTTCTTCTTCTTCTTTATCATTATCTTCCTCTGTGGCCATTTTGGATTCATCTACAACTCCAGCAAATGGGAGTGGATTTGGATTGGGGTACTGGAATCAACCTCTTTTCTGGTCTGATCTTCCAACGACCAATGGTGCACATCCATAA 1092 0.4872 MIQELLGGSSGFLSSGDRKISVNSASVFAPPPIPSPSLPSSAAATTSGGGGAGNTAAATSSNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGSLRNVPIGGGCRKNKTVSASSNSVAAGKASVGVAKMKTAASELGSRSGLGAGVFDHQELPASPILWGSPQNSHVLALLRASQNHHPNPTSCPNNLIPNIGVTLKEEGNLMRSHMVTEPMGSNGLLNNVPPTSSFDPSLGLTSSFWRNNNLDHQPAAHHQSQNGGFVFGEHQNSGIQELYQRLRSSSSSANYCSDDSSSSLFLSNNMASSSSSSLSLSSSVAILDSSTTPANGSGFGLGYWNQPLFWSDLPTTNGAHP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1326 363 MobiDBLite consensus disorder prediction 30 69 - -
Lele56g1326 363 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 59 284 IPR045174 GO:0003700|GO:0006355
Lele56g1326 363 Pfam Dof domain, zinc finger 66 122 IPR003851 GO:0003677|GO:0006355
Lele56g1326 363 ProSiteProfiles Zinc finger Dof-type profile. 68 122 IPR003851 GO:0003677|GO:0006355
Lele56g1326 363 ProSitePatterns Zinc finger Dof-type signature. 70 106 IPR003851 GO:0003677|GO:0006355
Lele56g1326 363 MobiDBLite consensus disorder prediction 39 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1326 Lele-ChrLele56 16531214 16532305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1326 68 127 C2C2-Dof Transcription Factor Family AT5G60200 80.000 2.99e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele56g1326 zf-Dof 3.4e-32 No_clan