Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0994 ATGTCAGCTCCGGCGACGACGACGAAAGACGAGAGCCAGGGCTCAGGCGGCGGCCGGAAAAGCACCTCGGCAACGGCGGGGAGGCAGTTAGAGCAAGGGCTAAAGTGCCCGAGATGTGACTCGCCCAACACTAAATTCTGTTACTACAATAATTACAGCCTGACTCAGCCGAGGTTTTTCTGCAAGACGTGTCGTAGATACTGGACAAAAGGCGGAGCCTTGCGTAACGTTCCGATTGGCGGCGGTTGCCGGAAGAACAAGAAACTGAAATCTTCATCGTCATCCTCAAGACTCTCAAATGACGGTGGTTTTTCCCCTTCTCTGGATTTTCACCTCGGTGGTGGCACGGCCGCCGCTAGCTTCTTACCCTTCCCTAGGCTCAACGATCATCATCATCATCATCCTCCATCTTTCAACCTTGAAGGAACCTCGAGTTCTTTCAATATTGAATTCAATAATTACCCACTTAACGGTGGTGTAATTCAAGGCATGAGCTCAATGAACATTCAGAGTAGCCTTGCTTCTTCGATTGAGTCTCTGAGCTCAATAAACCAAGACCTGCACTGGAAACTGCAACAGCAGAGACTAGCTATGCTGTTTGGAGGGGATGGTACGGGTCTTAAAGATAACCGACCCTTTTCAGCGATTAATCTCGAGAACCAGAGTCGTCGTCATCATCAGAAATCAGTACCACAACCTATTTTGTTTCAGAATCTTGAGATTTCGAAGCCTGAAGAGATCTGTCCGGTGGTCGGAAACTCGAGAAGAGATGCACCCACAGAGTGGTTCTTCGGTAGCTCGTATGCTTCAGTGACTCCAACACCAACAACTACAAGCAGTGGTGGTGGTGGTGGAGGAGTTAATGGGAATGATAATAATGGAAGCAGTAGCTGGAGTCTTCAGGCTGGTTGGGGTGATGTGCAGCAGCAATACAGTGCTTTGCCCTAG 948 0.4926 MSAPATTTKDESQGSGGGRKSTSATAGRQLEQGLKCPRCDSPNTKFCYYNNYSLTQPRFFCKTCRRYWTKGGALRNVPIGGGCRKNKKLKSSSSSSRLSNDGGFSPSLDFHLGGGTAAASFLPFPRLNDHHHHHPPSFNLEGTSSSFNIEFNNYPLNGGVIQGMSSMNIQSSLASSIESLSSINQDLHWKLQQQRLAMLFGGDGTGLKDNRPFSAINLENQSRRHHQKSVPQPILFQNLEISKPEEICPVVGNSRRDAPTEWFFGSSYASVTPTPTTTSSGGGGGGVNGNDNNGSSSWSLQAGWGDVQQQYSALP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0994 315 MobiDBLite consensus disorder prediction 1 29 - -
Lele52g0994 315 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Lele52g0994 315 MobiDBLite consensus disorder prediction 266 302 - -
Lele52g0994 315 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
Lele52g0994 315 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 185 IPR045174 GO:0003700|GO:0006355
Lele52g0994 315 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0994 Lele-ChrLele52 6543243 6544190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0994 1 315 C2C2-Dof Transcription Factor Family AT5G65590 37.853 8.61e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele52g0994 zf-Dof 1.2e-32 No_clan