Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0255 ATGATCCAGGAACTGTTGAGCGGTGCTGGTCTCATTGCAGGCGAAAGGAAAATCTCCACTAACGGAGCAGCCGCAGTTTTCCCGCTTATCACTACATCTCATACTTCTGTTCCTTCTTCTTCTTCATCTCACCCTTCAACCCCCATCACTACTTCTACCACCGCCACCGCTGCAGCTGCAGCTGCCGCCACATCCACAATCTCCGAGAACCAAAATCTGAGGTGCCCGAGGTGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGTGGCGCTCTCAGGAATGTTCCAATCGGTGGTGGTTGCCGGAAGAACAGGAACGTCGGCGCCTCCAACTCCGTTGTGAAGACGAGCGTGGCTAAGATGAAAACAGCTGCACCAACGGAGCTCGAAAGGTCGGTGCTCGGGGTAGCGGGGTTCATCGACCACGACCTTTCTTCAAACCCTATTCTATGGGGCTCGCCGCAAAATTCTCCCGTGTTAGCTCTACTGAGATCTGGTCATGAAAACCATAACCCTAACCCTAGTCTTCCCATCTCCGTCAATGCTGTTAAGGAAGAAGGGAACTTGATAGTGTCCCACAGGGTGACTGAGCCAGTGGTTGGAAATGGGTTGGTTAATGGTCAAGCCCTAAACTTTGATTCTGTTGGTCAATTTCCCACACTTGGGCTCTGCAGCTCTATCTGGAGAAGCAGTAATAGTAATAATAACAATAATCAAGATGGGTTCTTAGTTGGAGAACATGAGGGCAGTGGAATTCAAGAACTGTACCAGAGGCTGAGATCATCATCAGCTAATTATTGCAGCGACAATAACTCGTCACAGGTGTTGGGGAACATGGCTTCTTCTTCACACGCAACTTCGTCTTCATCAGCTAATTTGGGGTCAGTTCCAGTAGTCGCAGGGGATGATCAATTGGGGTACGCCTGGAATCCAACTCTTTCGTGGTTTGATCTTTCCACCACCAATGGTACTTAA 1038 0.4942 MIQELLSGAGLIAGERKISTNGAAAVFPLITTSHTSVPSSSSSHPSTPITTSTTATAAAAAAATSTISENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRNVGASNSVVKTSVAKMKTAAPTELERSVLGVAGFIDHDLSSNPILWGSPQNSPVLALLRSGHENHNPNPSLPISVNAVKEEGNLIVSHRVTEPVVGNGLVNGQALNFDSVGQFPTLGLCSSIWRSSNSNNNNNQDGFLVGEHEGSGIQELYQRLRSSSANYCSDNNSSQVLGNMASSSHATSSSSANLGSVPVVAGDDQLGYAWNPTLSWFDLSTTNGT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0255 345 Pfam Dof domain, zinc finger 71 127 IPR003851 GO:0003677|GO:0006355
Lele52g0255 345 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Lele52g0255 345 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Lele52g0255 345 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 60 274 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0255 Lele-ChrLele52 1498240 1499277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0255 32 137 C2C2-Dof Transcription Factor Family AT5G65590 54.206 9.33e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele52g0255 zf-Dof 9.6e-32 No_clan