Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1532 ATGTTGTCGTCGTCGTCATCGGAGGTTAAGGATCCCTCCATCAAGCTCTTTGGGACGATGATTTCTATGCCGCTTCAATGCTCTGTTTGCGCTACTCACTCTTCTGGACCTCTTCCTCCTTCATCTTCTTCCTCTCCAGATACCTCTGCGAGGGATCAGGATTCATCAAAGATAGAACTCATCACCCCAGAGCAAGATGATGGTGCTTCATATCAAACCACAGAGGATCCGAAATCTCCCACATCTTCAGGAGTTTGTGAGAACCCTAAGACCCTCTCACCTTCAGCTGAAAGAGAGAATTCTGTACTGAACTCATCTAAAACTGGAGAGGAAAGTGAGACAAGCACACAGCAGGAAAAGACTCCCAAGAACCCTGACAAGATAATTCCGTGCCCTCGATGCAATAGCATGGTCACCAAATTCTGTTATTTTAACAACTATAATGTCAATCAACCTCGTCACTTCTGTAAGAACTGCCAGAGATACTGGACTGCTGGAGGAACGATGAGAAATATGCCTGTTGGAGCTGGTCGCCGCAAGAACAAGAGCTATTGTGCTTCTAATTATCGACACATAGTGATTCCTGAGTCACTTATAACAGCGGCCAATGCAAATGGGTTACACAACACTGCCTTGAAAAATGGAGAGACGGTCTTGACCTTTGGCTCAGATTCTGCCATATGTGATTCCATGGCTTCTGTTTTGAACCTTGCAGAGAATACCCAGAATGGTGTTCTGAATGGAGTTCATATACCCAAGCAGAATATTACTGTCCCTTGTGGTAGAGAAGATAATGGTGATGACCGTTCAGTTGGAGCTTCTGTCACAACTTCAACTTCATCAGAGAAGAAAGCCAACGCTGGTTCCCAAGAATCTGTGAATAAAACCTTTGAAGGTTTCCCGCCTCAATTACAATGCATTCAAGGTTCTCCTTGGCACTATCCATGGAATTCTCTTGTGCCTCCTCCTACTTTATCCCCGGGTTATCCAGTGTCCTTCTATCCCCCACCTGCATATTGGGGTTGTGCATTACCAGCCTCCTTGAACATAGCATGTGTTTCTCCACAATCTTCTCTGAACAACCCTTCCCCTAGGTCCATCTCCAATTCACCAACCTCGAGGAAACACTTGAGGGATGGAAGAATCATCACTCAAGCCAACTCTCAGAAAGAAAAGCCTGATGCAGAGAGTAAGGACTCAGAAAATGGTGTCATGATCCCCAAGACACTAAGAATTGATGATCCCACTGCGGCTGCAAAGAGTTCTATACGGTCAACACTAGGGATCAAGAATGGAAAGGCTAATCCCTTCAATGGTTGTGTAGGCCTCTTCAAGGAAATTCCATCTAAGGAAGATGACCAGAATCATCATCATCACATGGTTGAGGTATTGCCCATGCTACATGCGAACCCGGCAGCCTTATCACGATCTGTTGCTTTCCACGAGCAGCAGGCCTAA 1458 0.4568 MLSSSSSEVKDPSIKLFGTMISMPLQCSVCATHSSGPLPPSSSSSPDTSARDQDSSKIELITPEQDDGASYQTTEDPKSPTSSGVCENPKTLSPSAERENSVLNSSKTGEESETSTQQEKTPKNPDKIIPCPRCNSMVTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNMPVGAGRRKNKSYCASNYRHIVIPESLITAANANGLHNTALKNGETVLTFGSDSAICDSMASVLNLAENTQNGVLNGVHIPKQNITVPCGREDNGDDRSVGASVTTSTSSEKKANAGSQESVNKTFEGFPPQLQCIQGSPWHYPWNSLVPPPTLSPGYPVSFYPPPAYWGCALPASLNIACVSPQSSLNNPSPRSISNSPTSRKHLRDGRIITQANSQKEKPDAESKDSENGVMIPKTLRIDDPTAAAKSSIRSTLGIKNGKANPFNGCVGLFKEIPSKEDDQNHHHHMVEVLPMLHANPAALSRSVAFHEQQA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1532 485 PANTHER CYCLIC DOF FACTOR 2 8 483 IPR045174 GO:0003700|GO:0006355
Lele51g1532 485 MobiDBLite consensus disorder prediction 30 51 - -
Lele51g1532 485 MobiDBLite consensus disorder prediction 357 405 - -
Lele51g1532 485 MobiDBLite consensus disorder prediction 259 295 - -
Lele51g1532 485 Pfam Dof domain, zinc finger 127 183 IPR003851 GO:0003677|GO:0006355
Lele51g1532 485 MobiDBLite consensus disorder prediction 66 112 - -
Lele51g1532 485 ProSiteProfiles Zinc finger Dof-type profile. 129 183 IPR003851 GO:0003677|GO:0006355
Lele51g1532 485 MobiDBLite consensus disorder prediction 357 371 - -
Lele51g1532 485 MobiDBLite consensus disorder prediction 30 128 - -
Lele51g1532 485 MobiDBLite consensus disorder prediction 270 295 - -
Lele51g1532 485 ProSitePatterns Zinc finger Dof-type signature. 131 167 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1532 Lele-ChrLele51 13955061 13957439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1532 8 483 C2C2-Dof Transcription Factor Family AT3G47500 40.816 3.15e-82 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele51g1532 zf-Dof 4.8e-30 No_clan