Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1410 ATGCCATCGAAGCCCGTTAACTCCGTCACCGTCGCTGCCATGATTAGTTTCAGTTTTCTCATCCTTTTCTTCTCCGGTGTCCTTGAGCTTCCCTCCGTATCGTCATCCGTCCAACCCATCAACGATCGCATCACCTCCGCACCAGAACCTTTCACCGATCTGGTGGGTGCCTTCAGGAAATGGGACTCTCAGGTGGGTTGTCCTCGTTTCAGGCAGAAACACAGTGAAGTTAACCTGCTAAACAAATCAAGGACTTCTTCTTTGCAAGAGATTGCCGGAGAATCGGAATGTGGACGCTTGAAATCGAGCCATGTTAGCGTTTTGGTCAAGGGCTGGACTTGGATTCCTGATAATTTAGACAATTTGTACTCTTGCCGATGTGGGTTGAGCTGTCTATGGACTAAATCTTCTGTTTTGGCGGACAAGCCTGATGCCTTGTTGTTTGAAACAACCACGCCTCCTCTACGGAGACGTATGGGACAGCCACTTCGTGTATACATGGATCTTGAAGCTGGTAGAAGGCGATCAGGCCGGGAAGATTTATTTATTAGTTATCATGCTGAAGATGATGTACAGTCAACCTATGCAGGTGCTCTGTTTCATAATGGCCGAAACTATTATATCTCCCCTTACAAAAACAACGATACGCTTGTCTATTGGTCTTCGTCAAGGTGTCTTTCGCAAAGGAATGAACTTGCTGAGAAACTACTTAGCTTGCTGCCCCACCATTCATTTGGCAAATGCCTTAATAATGTTGGTGGTCCAGACATGGCTCTATCCTTTTATCCCAAGTGTGCAAATGATGCTAGTGTTACCCCAAAATGGTGGGATCACTTGCATTGCGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAATACTTGGACCGAAAGTTATGTGACAGAGAAGTTATTTTATGCCCTGGACGCGGGCGCGGTCAGCTCATGCGGTAAAAGGCACGAGGTTGATAGGAATTTGATGAGTATGATTGATGATGAATCCAGTGGTGAGGCCAACATTACAGGAGTTGATTGTGGATGTATCAATTTTGACAAGGGGGGAATATTTCGACCAGAAAAGGGAACGCTGAGAGACGCCTTGTTGCTAATTGGATCGAAGATGAAGCATTTGGCGGCGTTTGTTTTTGTTTCGATTCATTCTTTGCTCTTCAATTTTTCCTTTTTTTCTTCCGCTCAGTCCTTCTCGGTGGATGGGACGGTGTTGGAATTGGATGCATCCAACTTCGACTCCGTGATATCGACCTTCGATCTTGTCTTCGTTGACTTCTACGCTCCCTGGTGCGGTCACTGCAAGCGTCTCTCTCCTGAGTTAGATGCAGCTGCCTCTGTACTTGCTGCCTTGAAGGAACCCATTATCATTGCAAAAGTAGATGCAGACAAGTTTACCGGCCTTGCAAAAAAATATGACGTTGATGCATATCCTACCCTTATGCTGTTCAGTAATGGTATCCCCACGGAATATCATGGACCAAGGAAAGCAGATTTACTTGTTCGTTACCTGAAGAAGTTTGCTGCTTCTGATGTTTCCATCCTTGATTCAGATTCTGCTATCAGTGACTTTGTTGAAGCAGCTGGCACCTTTTTCCCCATATATATTGGCTTTGGGTTGAACAATTCGATGATTGAAGAGTTAGCCCAAAAATATAAGAAAAACGCATGGTTTTCTGTAGCAAAGGATTTTTCGGAAGACGTTATGGTATTGTACGATTTTGATAAGGTTCCCGCTTTGGTTTCTATTAACCCAAGTTACAATGAGCGGAGCACTTTTTATGGTCCATTTGAAGAGGAATTTTTGGAAGATTTTGTAAAACAAAACCTGATCCCTTTAGCTGTTCCCGTATCCCGTGACACACTGAAGTTGATGAGTGCTGATGGGAGAAAAATTGCTCTAACAATTGTGGAGGATGAAAATGAAGGAAAAACAACGGAACTGATTAAGTTATTGAAGGCTGCTGCATCTGCAAACCGTGATTTAATATTTAGTTATGTTGGGGTTGAACAGTTGGAGGAATTTGCAGAAAAATTTGACATCAGTACTAAACTACCAAAGATGGTCATTTGGGATGGAAGTGATGATTACCTTACTGTTGTTGGTTCGGAAAGCATAGACGGGGAGGATCAGGCAAGCGAAATAACTAGATTAATAGAAGGATACAGGGAAGGGAAAACATTGCAGAAAAGAACTAGTGGCCCATCACTGATGAAAGTATTCCATAGATCATTCGACATCAGAATGGTTTACATATTTGTGTTTGTGGTGGCAGTATTGATGCTTATTCAGACCTTATACAAAGGAGACGACGATTACGAGAGAGTACCGAATCAAGAGCAGGGCGATCATGCCAGAAGCTCTGTGTTGGATGGCCAGAGCAAAGAGTATAAACCTGGAGACAAGCAAGATTAA 2427 0.4355 MPSKPVNSVTVAAMISFSFLILFFSGVLELPSVSSSVQPINDRITSAPEPFTDLVGAFRKWDSQVGCPRFRQKHSEVNLLNKSRTSSLQEIAGESECGRLKSSHVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSSVLADKPDALLFETTTPPLRRRMGQPLRVYMDLEAGRRRSGREDLFISYHAEDDVQSTYAGALFHNGRNYYISPYKNNDTLVYWSSSRCLSQRNELAEKLLSLLPHHSFGKCLNNVGGPDMALSFYPKCANDASVTPKWWDHLHCAMSHYKFVLAIENTWTESYVTEKLFYALDAGAVSSCGKRHEVDRNLMSMIDDESSGEANITGVDCGCINFDKGGIFRPEKGTLRDALLLIGSKMKHLAAFVFVSIHSLLFNFSFFSSAQSFSVDGTVLELDASNFDSVISTFDLVFVDFYAPWCGHCKRLSPELDAAASVLAALKEPIIIAKVDADKFTGLAKKYDVDAYPTLMLFSNGIPTEYHGPRKADLLVRYLKKFAASDVSILDSDSAISDFVEAAGTFFPIYIGFGLNNSMIEELAQKYKKNAWFSVAKDFSEDVMVLYDFDKVPALVSINPSYNERSTFYGPFEEEFLEDFVKQNLIPLAVPVSRDTLKLMSADGRKIALTIVEDENEGKTTELIKLLKAAASANRDLIFSYVGVEQLEEFAEKFDISTKLPKMVIWDGSDDYLTVVGSESIDGEDQASEITRLIEGYREGKTLQKRTSGPSLMKVFHRSFDIRMVYIFVFVVAVLMLIQTLYKGDDDYERVPNQEQGDHARSSVLDGQSKEYKPGDKQD 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1410 808 MobiDBLite consensus disorder prediction 778 808 - -
Lele48g1410 808 CDD PDI_a_family 409 508 - -
Lele48g1410 808 Pfam Thioredoxin-like domain 552 702 - -
Lele48g1410 808 ProSiteProfiles Thioredoxin domain profile. 384 513 IPR013766 -
Lele48g1410 808 Pfam Thioredoxin 408 510 IPR013766 -
Lele48g1410 808 FunFam Protein disulfide-isomerase 5-2 396 512 - -
Lele48g1410 808 FunFam Alpha-(1,4)-fucosyltransferase 164 343 - -
Lele48g1410 808 PRINTS Thioredoxin family signature 426 434 - -
Lele48g1410 808 PRINTS Thioredoxin family signature 434 443 - -
Lele48g1410 808 PRINTS Thioredoxin family signature 477 488 - -
Lele48g1410 808 SUPERFAMILY Thioredoxin-like 549 625 IPR036249 -
Lele48g1410 808 Gene3D Glutaredoxin 603 740 - -
Lele48g1410 808 Gene3D - 173 315 IPR038577 -
Lele48g1410 808 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 96 314 - -
Lele48g1410 808 ProSitePatterns Thioredoxin family active site. 427 445 IPR017937 -
Lele48g1410 808 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 213 314 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele48g1410 808 SUPERFAMILY Thioredoxin-like 402 511 IPR036249 -
Lele48g1410 808 MobiDBLite consensus disorder prediction 793 808 - -
Lele48g1410 808 Gene3D Glutaredoxin 397 519 - -
Lele48g1410 808 PANTHER PROTEIN DISULFIDE ISOMERASE 390 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1410 Lele-ChrLele48 17996753 18004130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1410 1 314 Xyloglucan Fucosyltransferase1 AT1G71990 66.352 1.60e-152 450