Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0015 ATGTGGGTGATGAATCGCGTTTCTGTCTTTTATAAGTATTCACGCTTTCATTTTTCTTTCTTGAAATCTTGGATGGAGATACGTGATGTGTATAACCTTGATCAGCCTCTGCTTCGTTGGTTGGTTGGAGATGAGTTGAAGTACACAACCGCCAAGTCACTTTTTGAAGATAGTTCCAGTTTCGCATCAATCTTCCAACTGTCAAAACCAGCCCGTACCTGGGAATATATTTCTGCTGTAACCCAAGTGGTAAGTTTGTTTGATTTGATCAAGTTTGGTTCAATGTTTTGTTTTCTCTCTTCATGCAGTTGGTTTGAAATCTCTGGGAGTGGTGAAAGCCCAACAGAGACGAGTACCGCTAGGAAGCTTGTTTCTTCTAGTTCTGAATCGGACCTTGATCGACCCAATATTGAAGATTACCTCCCATCTGGGTCCACCATTCAACAAGAACCTCATGGGAAGCTGTGCCTGCATGACTTACTCAACATTTCTCCTACTTTATCCGAGGCAGCTGGTGCCATTGTAGATATATTTGATATTGTTCCCTTCAAGGGTCCTAGTGCTGACAATAGGATGGATGATAATATTTCTTTCATCCTTCATTCCTGTGCATTTCCTATTGAAGGGACACGACAAGTTGAGGGAAAAGATCGAGTTCTCCCTACATTTCTTGAACAAGTTTTTGTGGCCAACTATACTTCCGTGATTGATTTCATTATTTTAGAACAGAAGACTGCATTTGCTGTAATTATGCAAAAGCATCCTCGATGGGTTGGATTATTGCAGAGCACCATTTTGGAGAGTGTAGGATGTATCTGGTTCAATCGTTCTGAGGCAAAGGATCGAGAAATTGGTGCATTTGAACTTGGCTGCACAGTTTGCCTTGTTGCAATAAAATATAATAAAATATTTGTGGATGCTTTTTGGAATAGTCGAAAGCAATCATTCACCATGCATCTGTTACAGCTAATGACATCCTGGGCTGTTGTTTGTGATGTTTGGTACTTGGAGCCCCAGAAACTGAAGCCAGGAGAAACAGCCATTGAGTTTGCTGAGAGCTTCTTGATTAGCACCCCATGTGACATCTTCACCATCTGCACTTTTCGTCTCTGGAGTTCATCTCAATATGTATCTACTCTGACGCCTCTCATTTGCGGCACATCTTCAAGTTTTACCATCTCGAATTTTCAAAAGTCGCACTTTCAACTGGAGCTTGAGCTCATTACCCGTGGTCCCTTCTACATTTATGAAGTTTCAGCTCCTTTCCAAGTCCTTGGCCGAAAAAGCTCCTTTCAAAGTCTTTCTCTCAGTTTCTCACTTAGATCCCGTTTGGATTGGGGCTGCGTCTTCCCTGGGGCAACCCATTCGCAATTAACTATATCAATCTTCGTAGATTATCTCATCCGGCCTGGAAAAGTTGAGGCAGAAATGGGCCTTGCTCGGTTATTACTGGTAATCGTATTCGGTGTCGCCGCCACATCATGGGTGGTGGTGGAAGCTCAGCCAGAGGCGAAGTTCAAATGCAGCTCGGTAGGTAAAACGTGTCGTTCCTTGGTGGATTATTCGTCCCCAAACGAAACCACCTTAGGCCACATTCAAAATCTCTTCAACTTGAAGCACGTTCTGGACATAGTGGGTGCCAACGCCCTCCCCTCCACCACCCGAGGCAACCACACCGTTGAAAAGGGCGCCATTATTAAAATCCCCTTTCAGTGCAAGTGCTCCAACGGCACCGGCTTGTCCAACAAGACGCCTCTCTACACCATCCAGAAAGATGACACTCTTTCCCACATAGCCATGGAAGTGTTCTCGCGTTTGGTCACTTTCCAACAAATCCAAACGCTCAACAACATATCCGACGCCACAAAAATTCAGCCTGGCCAGAAGGTGTGGATCCCTCTCCCTTGCAGCTGCGATCAGGTGGACGGCACCGATGCCGTCCACTATGGACATCTCGTGGCTATGGGGAGCTCCTTTCCGCAGATTGCTCAACAATACGGCACCACCCAGGATACCCTTCTCAACCTCAACGGCATTTCTGACCCTAAGTCGCTTCAAGCCGGTCAAATCATCGATGTCCCCCTCAAAGCTTGTTCCTCATCGACGGTAAAAAATGGCTCATTGGACTACCCTCTGCTCGTTGCAAATGGTACAGACACCTACACCGCCAATGGCTGCGTCAAGTGCAGCTGTGACTCCGCCGCCAATAACGCCACATTACAATGCGAGCCATCGCAAGTTAAACCATATAGATGGGAAACATGCCCCTCTATGCTATGCGGAAATTCAACCATAGGCACCGTCACTTCCACAGATTCCTGTACTCGCACCATCTGTGCTTACGCTGGTTATAACACCCAAAACCAAACTATTTCCGCCGCACTTGTCAACGAGTCCACTTGTCCTGCACCAACAGCATCAGGAGCATCCAGGATCAGCTTGCAAGGCTGGGGTTGGAGTCATCTTGTGATTGCCCTTCACGTTATCTTCTTTTGTGTCTATCTTTTGTAG 2511 0.4604 MWVMNRVSVFYKYSRFHFSFLKSWMEIRDVYNLDQPLLRWLVGDELKYTTAKSLFEDSSSFASIFQLSKPARTWEYISAVTQVVSLFDLIKFGSMFCFLSSCSWFEISGSGESPTETSTARKLVSSSSESDLDRPNIEDYLPSGSTIQQEPHGKLCLHDLLNISPTLSEAAGAIVDIFDIVPFKGPSADNRMDDNISFILHSCAFPIEGTRQVEGKDRVLPTFLEQVFVANYTSVIDFIILEQKTAFAVIMQKHPRWVGLLQSTILESVGCIWFNRSEAKDREIGAFELGCTVCLVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQKLKPGETAIEFAESFLISTPCDIFTICTFRLWSSSQYVSTLTPLICGTSSSFTISNFQKSHFQLELELITRGPFYIYEVSAPFQVLGRKSSFQSLSLSFSLRSRLDWGCVFPGATHSQLTISIFVDYLIRPGKVEAEMGLARLLLVIVFGVAATSWVVVEAQPEAKFKCSSVGKTCRSLVDYSSPNETTLGHIQNLFNLKHVLDIVGANALPSTTRGNHTVEKGAIIKIPFQCKCSNGTGLSNKTPLYTIQKDDTLSHIAMEVFSRLVTFQQIQTLNNISDATKIQPGQKVWIPLPCSCDQVDGTDAVHYGHLVAMGSSFPQIAQQYGTTQDTLLNLNGISDPKSLQAGQIIDVPLKACSSSTVKNGSLDYPLLVANGTDTYTANGCVKCSCDSAANNATLQCEPSQVKPYRWETCPSMLCGNSTIGTVTSTDSCTRTICAYAGYNTQNQTISAALVNESTCPAPTASGASRISLQGWGWSHLVIALHVIFFCVYLL 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0015 836 CDD LPLAT_LPCAT1-like 227 352 IPR045252 GO:0008374
Lele47g0015 836 Pfam LysM domain 653 694 IPR018392 -
Lele47g0015 836 Pfam LysM domain 587 633 IPR018392 -
Lele47g0015 836 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 482 804 - -
Lele47g0015 836 SUPERFAMILY LysM domain 586 634 IPR036779 -
Lele47g0015 836 CDD LysM 661 693 IPR018392 -
Lele47g0015 836 Gene3D LysM domain 581 642 IPR036779 -
Lele47g0015 836 MobiDBLite consensus disorder prediction 110 135 - -
Lele47g0015 836 SUPERFAMILY LysM domain 650 694 IPR036779 -
Lele47g0015 836 CDD LysM 587 632 IPR018392 -
Lele47g0015 836 ProSiteProfiles LysM domain profile. 649 693 IPR018392 -
Lele47g0015 836 ProSiteProfiles LysM domain profile. 585 632 IPR018392 -
Lele47g0015 836 Gene3D LysM domain 644 706 IPR036779 -
Lele47g0015 836 SMART LysM_2 586 633 IPR018392 -
Lele47g0015 836 SMART LysM_2 650 694 IPR018392 -
Lele47g0015 836 MobiDBLite consensus disorder prediction 110 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0015 Lele-ChrLele47 122554 134166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0015 490 791 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 47.855 1.12e-84 272