LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele46g1496	ATGGGCCTTGCTCGGTTATTACTGCTAATCATACTCGGTGTCGCCGCCGCATCATGGGTGGCGGTGGAGGCTCAGCCAGAGGCGAGGTTCAAATGCAGCTCGGCAGGTAAAACGTGTCGTTCCCTGGTGGATTATTCGTCCCCAAACGAAACCACCTTGGGCCACATTCAAAAGCTCTTCAACTTGAAGCACGTTCTGGACATAGGGGGCGCCAACTCCCTCCCCTCCACCACCCGAGGCAACCACACCGTTGAAAAGGGCGCCATTATTAAAATTCCCTTTCAGTGCAAGTGCTCCAACGGCACCGGCTTGTCCAACAAGACGCCTCTCTACACCATCCAGAAAGATGACACGCTTTCCCACATAGCCATGGAAGTGTTCTCGCGTTTGGTCACTTACCAACAACTCCAAACGCTCAACAACATATCCGACGCCACAAAAATTCAGCCCGGCCAGAAGGTGTGGATCCCTCTCCCTTGCAGCTGCGATCAGGTGGACGGCACCGATGCCGTCCACTATGGACATCTCGTGGCTATGGGGAGCTCCTTTCAGCAGATTGCTCAACAATATGGCACCACCCAGGATACCCTTCTCAACTTCAACGGCATTTCTGACCCTAAGTCCCTTCAAGCCGGTCAAATCATCGATGTCCCCCTCAAAGCTTGTTCCTCATCGACGGTGAAAAATGGCTCCTTGGACTACCCTCTGCTCGTTGCAAATGGTACCGACACCTATACCGCCAATGGCTGCGTCAAGTGCAGCTGTGACTCCGCCGCCAATAACGCCACATTACAATGCGAGCCATCGCAAGTTAAACCATATAGATGGGATGCATGCCCCTCTATGCTATGCGGAAATTCAACCATTGGCACCATCACTTCCACAGATTCCTGCACTCGCACCATTTGTGCTTACGCTGGTTACGACAACCAAAACCAGACTATTTCCACCGCTCTTGTCAACGAGTCCACTTGTCCTGCACCAACAGGATCAGGGGCATCCAGAATCAGCTTGCAAGGCTGGGGTTGGAATCATCTTTTGATGGCCCTTCACTTTATCTTCTTTAGTGTCTATCTTTTAGTTTTGATGGGAATAACTCACTCTAGGTTTGAGTTGAAGATCAAATTATCAGTTGAAAAGTCAGACCTGAGAAGATCAATACCGTAG	1167	0.509	MGLARLLLLIILGVAAASWVAVEAQPEARFKCSSAGKTCRSLVDYSSPNETTLGHIQKLFNLKHVLDIGGANSLPSTTRGNHTVEKGAIIKIPFQCKCSNGTGLSNKTPLYTIQKDDTLSHIAMEVFSRLVTYQQLQTLNNISDATKIQPGQKVWIPLPCSCDQVDGTDAVHYGHLVAMGSSFQQIAQQYGTTQDTLLNFNGISDPKSLQAGQIIDVPLKACSSSTVKNGSLDYPLLVANGTDTYTANGCVKCSCDSAANNATLQCEPSQVKPYRWDACPSMLCGNSTIGTITSTDSCTRTICAYAGYDNQNQTISTALVNESTCPAPTGSGASRISLQGWGWNHLLMALHFIFFSVYLLVLMGITHSRFELKIKLSVEKSDLRRSIP	388

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele46g1496	388	PANTHER	LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2	6	328	-	-
	Lele46g1496	388	Gene3D	LysM domain	105	164	IPR036779	-
	Lele46g1496	388	ProSiteProfiles	LysM domain profile.	173	217	IPR018392	-
	Lele46g1496	388	ProSiteProfiles	LysM domain profile.	109	156	IPR018392	-
	Lele46g1496	388	Gene3D	LysM domain	165	231	IPR036779	-
	Lele46g1496	388	SUPERFAMILY	LysM domain	174	218	IPR036779	-
	Lele46g1496	388	Pfam	LysM domain	177	218	IPR018392	-
	Lele46g1496	388	Pfam	LysM domain	111	157	IPR018392	-
	Lele46g1496	388	CDD	LysM	111	156	IPR018392	-
	Lele46g1496	388	SUPERFAMILY	LysM domain	110	158	IPR036779	-
	Lele46g1496	388	CDD	LysM	180	217	IPR018392	-
	Lele46g1496	388	SMART	LysM_2	174	218	IPR018392	-
	Lele46g1496	388	SMART	LysM_2	110	157	IPR018392	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele46g1496	Lele-ChrLele46	21568450	21570808	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele46g1496	9	311	LysM Receptor-like Protein (LYPs) Gene Family	AT2G17120	47.039	1.13e-89	273