Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0928 ATGGTCTTCTCTTCCATTCCAGTCTTTCATCTAGATCCACCACCCAACTGGCCTCACCACCAGCAACTTGATCAGCAGCCAGAAGGAGGACTGATTCATGCCCAGAATTCCCAGGTTCCTCCTCCTCCGCCGCCGCCACCACCGGTTGCTGATGCCGGTGGTGGTGACAAAGGCTCGACGACGAGGTCAGGATCCATGGCGGATCGAGCTCGGCTAGCGAAGATAGCACAGCCTGAAGCTGCAGTGAAATGTCCACGGTGTGAATCAACCAACACCAAGTTCTGTTACTACAACAATTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACCCGAGGCGGCGCGTTGAGAAATGTCCCTCTTGGAGGAGGTTGCAGAAGGAAGAACAAAAGAAGCAAAGGAACTAACATCAAATCATCAAAATCTCCCAACAAAGCAACATCAGGTTCCATTATTTCCAACTCTTCTGTAAGGGCAAATAATTCCTCAAGTAACTGTTGCCCTAGTAGTGATCATCATCACTTGATAGGTCATCACTTACCATCTTCATTACTCTTCCCTCCTCCTCCTACTACTACATCTCATAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAATCATGATCCTGAATTTCAAATTGCTTGTAATAACAATAATGGGTTTATTACTACTACTGAGCAATGGAAGCTACCAAGTCTTCTGCAGCGTCATCAACAATTTCCAGCAACATTCATGAGTAATCTTGAGGAACCAGTAAGGTTATATCATCAGTTTCAAAGATCAGAAAATGTTGAGATCGAACCTTCTTCAAGGACATTATTATATTCTGCTGGTGATCATCATCTTCATCGTCGTCAGCTTACTTCTACTACAGTTAAAATGAAGGAAAATATGGATCAAGTTGTGGGATTATCCAAGACTCTTGCGGGTAACTCAGAAAATAATAATAATGAACAATTCTGGGAATTAGCAAATAATAATGGCGGCAGTGCATGGAATAGCAATAATAATAATGTTTCTATTAGTTTCGCTTCTTCTTCTTCCATCACCCATCTCCTGTGA 1092 0.4386 MVFSSIPVFHLDPPPNWPHHQQLDQQPEGGLIHAQNSQVPPPPPPPPPVADAGGGDKGSTTRSGSMADRARLAKIAQPEAAVKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPLGGGCRRKNKRSKGTNIKSSKSPNKATSGSIISNSSVRANNSSSNCCPSSDHHHLIGHHLPSSLLFPPPPTTTSHSYSDYDVVFGATNINHDPEFQIACNNNNGFITTTEQWKLPSLLQRHQQFPATFMSNLEEPVRLYHQFQRSENVEIEPSSRTLLYSAGDHHLHRRQLTSTTVKMKENMDQVVGLSKTLAGNSENNNNEQFWELANNNGGSAWNSNNNNVSISFASSSSITHLL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0928 363 SUPERFAMILY Formin homology 2 domain (FH2 domain) 40 348 - -
Lele46g0928 363 ProSiteProfiles Zinc finger Dof-type profile. 82 136 IPR003851 GO:0003677|GO:0006355
Lele46g0928 363 ProSitePatterns Zinc finger Dof-type signature. 84 120 IPR003851 GO:0003677|GO:0006355
Lele46g0928 363 MobiDBLite consensus disorder prediction 127 163 - -
Lele46g0928 363 MobiDBLite consensus disorder prediction 13 67 - -
Lele46g0928 363 Pfam Dof domain, zinc finger 81 136 IPR003851 GO:0003677|GO:0006355
Lele46g0928 363 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 69 279 IPR045174 GO:0003700|GO:0006355
Lele46g0928 363 MobiDBLite consensus disorder prediction 142 163 - -
Lele46g0928 363 MobiDBLite consensus disorder prediction 19 33 - -
Lele46g0928 363 MobiDBLite consensus disorder prediction 37 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0928 Lele-ChrLele46 17060704 17062005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0928 47 353 C2C2-Dof Transcription Factor Family AT3G55370 36.909 2.89e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele46g0928 zf-Dof 1.1e-31 No_clan