Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1180 ATGGGTCTATTGTCAAATCATAGAGGCTCAAGAACAGAGACAAACCAGGAAACTTTACCGGTTTCCACAGCTGGTTTATCGGTGCTGCCCAAGAAGAAATGGTCCAATCTAATGCCTCTGTTCGTGGCCCTTGTGGTCATAGCAGAGATCTCCTTCTTGGGTAAGTTGGATATGGCGAAGAACACAGTTATGGTCGATACTTGGGCTGACTTAATTTACTGGTCTCGTGAAGTCGTAGCAAAAGATGATTTGGGGATAGCTTATGAAGTCGTAGCGAAAGATGATGTGGGGATAGATATGTTTGGTGGGGGTCGAAGTTCAGAATCTGAGAGCTGTGAGGAGTGGTTAGAGAGGGAGGATGCTGTGACATATTCAAGGAACTTCACAAAGGAACCTATTTTGGTTAATGGAGCCGATGAGGAGTGGAAGTCGTGTGCTGTTGGATGCCAGTTTGGGTATAATTCAGGGAAGAAACCTGATGCAGGATTTGGCATACCTCAAGCAGCTGGGACAGCTAGTGTTCTACGATCTATGGAATCTTCGCAATACTATGCAGAGAACAATATTGCAATGGCAAGACGGAGGGGGTATAGCATTGTAATGACAACCAGTCTATCATCTGATGTTCCTGTTGGATACTTCTCTTGGGCTGAGTATGACATTATGGGACCTGTACAACCCAAAACTGAAAGTGCTCTTGCAGCTGCTTTCATTTCTAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAAGCTCTTGAAAAAGCAAACATCAAGATTGATTCTTATGGTGGTTGCCATAGAAACCGCGATGGAAGAGTGGACAAAGTGGAAACTCTAAAGCGCTACAAATTTAGCTTGGCATTTGAGAATTCAAATGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCTCTTGTTGCTGGTTCTGTTCCTGTTGTTATTGGCGCTCCAAATATTCAGGATTTTGCCCCATCCCCTGGTTCAATTTTACATATTAGAGAGATAGAAGATGTTGAATCAGTTGCCAAAACCATGAAACATCTAGCAGAGAACCCCAAGGCATATAACCAATCACTGGGGTGGAAGTATGAGGGCCCATCTGATTCTTTCAAGGCCCTTGTGGACATGGCAGCAGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCAACGGCGATTAGAGAGAAGGAAGAAAAGAGCCCAGGCTTCAAGAAGCGCCACTGCAAGTGCACTAGAAGTTCAGAAACTGTATATCACATATATGTGAGAGAAAGAGGAAGGTTTGAGATGGAGTCCATTTACTTGAGGTCAAGCAATTTGACTCTGGAAGCTCTGAAGTCTGCTGTGTTAAAGAAGTTCACATCCCAGAATCATATACCCATATGGAAGACAGAAAGGCCAGAAAGCGTCAGAGGAGGCAGTAAGTTAAAAATTTACAGAATATATCCCGTCGGGTTGACGCAGAGGCAGGCGCTGTATACCTTCAGCTTCAAAGGAGATGTTGATTTTGGAAACCACTTGGAAAGAAATCCTTGTTCCAAGTTTGAAGTCATATTTGTGTAG 1569 0.4366 MGLLSNHRGSRTETNQETLPVSTAGLSVLPKKKWSNLMPLFVALVVIAEISFLGKLDMAKNTVMVDTWADLIYWSREVVAKDDLGIAYEVVAKDDVGIDMFGGGRSSESESCEEWLEREDAVTYSRNFTKEPILVNGADEEWKSCAVGCQFGYNSGKKPDAGFGIPQAAGTASVLRSMESSQYYAENNIAMARRRGYSIVMTTSLSSDVPVGYFSWAEYDIMGPVQPKTESALAAAFISNCGARNFRLQALEALEKANIKIDSYGGCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVIGAPNIQDFAPSPGSILHIREIEDVESVAKTMKHLAENPKAYNQSLGWKYEGPSDSFKALVDMAAVHSSCRLCIHLATAIREKEEKSPGFKKRHCKCTRSSETVYHIYVRERGRFEMESIYLRSSNLTLEALKSAVLKKFTSQNHIPIWKTERPESVRGGSKLKIYRIYPVGLTQRQALYTFSFKGDVDFGNHLERNPCSKFEVIFV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1180 522 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 45 471 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele45g1180 522 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 231 396 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lele45g1180 522 Gene3D - 177 371 IPR038577 -
Lele45g1180 522 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 119 397 - -
Lele45g1180 522 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 179 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1180 Lele-ChrLele45 21980117 21984335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1180 1 522 Xyloglucan Fucosyltransferase1 AT3G19280 64.205 0.0 697