Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0858 ATGGTCTTCTCTTCTATTCCAGTCTGTCATTTTGATCCACCACCACCCAACTGGCCTCACCAGCAGCAACTTGATCAGCAGCCGGAAGGAGTACCGATTCATGCCCAGAATTCCCAGGTTCCGCCTCCTCCTCCTCCGCCTCCACGGCCGCAGGTTGCTGATGCTGGTGGTGGTGACAAAGGCTCGACGATGCTGGGATCCATGGCGGATCGAGCTCGGTTAGCAAAGATAGCACAGCCAGAAGAAGCTGTTAAATGTCCAAGGTGCGAATCAACCAACACCAAGTTCTGTTACTACAACAATTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACCCGAGGCGGCGCGTTGAGGAACGTCCCGGTGGGAGGAGGTTGCAGAAGGAAGAACAAAAGAAGCAAAGTAACTAATAACATCAAATCATCAAAATCTCCGAACAAAGCAGCATCAGGTTCCATTATTTGCAACAATTCCTCAAGCAATAACTGTTGCCCTAGTAGTGATCATCATCATCACTTGATAGGTCATCACTTACCATCTCCATTACTCTTCCCTCCTCCGACTACTACATCTCATAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAATCATGATCCTGAATTTCAAATTGGTTGTAGTAATTCTACTAATAACAACAATGGGTTTATTACTACTACTGAGCAATGGAAGCTACCAAGTCTTCTGCAGCATCATCAACAGTTTCCAGCAACATTCTTGAGTAATCTTGAGGCACCACCAGTAGGGTTATATCAGTTTCAAAGATCAGAACATGTTGAGATCGAGCCTTCAACGACACTATTTTATTCTGGTGCTAGTGATCATCATCGTCAGATTACCGCTAATAAAGTCAAAAAGGAGGAAAATATGGATCAAGTTGTGGGTTTATCCAAGAGTCTTACGGGTAAGTCAGAAAATAATAATAATGAGCAATTCTGGGAATTAGCAAATAATGGCGACAGCGAATGGAATATCAATAATAATGTTTCTATTAGTTTCGCTTCTTCTTCTTCCATCACCCATCTGTTGTGA 1083 0.4441 MVFSSIPVCHFDPPPPNWPHQQQLDQQPEGVPIHAQNSQVPPPPPPPPRPQVADAGGGDKGSTMLGSMADRARLAKIAQPEEAVKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRKNKRSKVTNNIKSSKSPNKAASGSIICNNSSSNNCCPSSDHHHHLIGHHLPSPLLFPPPTTTSHSYSDYDVVFGATNINHDPEFQIGCSNSTNNNNGFITTTEQWKLPSLLQHHQQFPATFLSNLEAPPVGLYQFQRSEHVEIEPSTTLFYSGASDHHRQITANKVKKEENMDQVVGLSKSLTGKSENNNNEQFWELANNGDSEWNINNNVSISFASSSSITHLL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0858 360 MobiDBLite consensus disorder prediction 130 157 - -
Lele45g0858 360 MobiDBLite consensus disorder prediction 12 65 - -
Lele45g0858 360 ProSiteProfiles Zinc finger Dof-type profile. 84 138 IPR003851 GO:0003677|GO:0006355
Lele45g0858 360 MobiDBLite consensus disorder prediction 37 52 - -
Lele45g0858 360 ProSitePatterns Zinc finger Dof-type signature. 86 122 IPR003851 GO:0003677|GO:0006355
Lele45g0858 360 Pfam Dof domain, zinc finger 82 138 IPR003851 GO:0003677|GO:0006355
Lele45g0858 360 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 67 271 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0858 Lele-ChrLele45 19193464 19194749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0858 66 141 C2C2-Dof Transcription Factor Family AT2G37590 84.211 1.03e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele45g0858 zf-Dof 3.8e-32 No_clan