Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0456 ATGAGGAGCGATATCCAGTTTCTCGTAGGCCTCGCGCTCTCCAGCATTCTCTGCCTCGTTCAAACCAAATCCATCATCGAGCTCTGTTCCTCCTCTGACTCCTGTTTCTCCCTTCTCTCCTTCGTCGTCCCCTGGGACTCCAAGCTCTCTGAAATCGCCTCACGATTCCAGGTGAACGTCTCTGACATCCTCACTGCCAACTCTGTTTTCCCGATATCACAGAAACTCTCCGATCAAATCATCAGATCCAAATCCGTCGTGAAGATTCCCATCTCGTGCGGTTGCGTCGACGGAATCCGGAGATCTAAGTCCATATACACAGTGCAAGCATCGGACACATTGGAGACCATATCGGAGGGATTCGGCGGGCTGGTGAGCGCCGACCAGATAGCGACGGGGAACAGCATAAATGCGACGAATCGTTTAACGAACGGAGGGAGGTTGGCGATATCGTTGCCGTGTACGTGCTTGAATAATGTGAGGAACGGTGAAACGACAGTGTATATGTCGTATGTGGTGAGAGAGCGAGAGAGCTTGAGGAGTATAGCGTCGGGTTCAAAAACGACAGGGTCTGATTTGGAAGCAGTCAATGGATTGAGTCACGACGCCGTCGAACCAGGAGATGTCATTGCCATTCCCATTGCAGCATGTTCATCAGCAACACTGAAGTGGTTTGCATTTGCAGCATGTTCATCAGCAACACTGAATTGGTACAACGAGAGTCTCATTGTCCCAAATGGCTCATACGCTCTTACTGCCTCTGACTGCATCAAATGCTCCTGTGGCCCCATTGATCTCAGGCTGCAATGTTATCCATCTGGTCTACCGGTTCCCTGCTTCAACTTACAATGCAAGGATTCCAATCTTGTAATTGGCGACCGACATGTCACGTATTCCAAACCAGGTTGTAATGTCAGTCAGTGTCTTTATCGTGGCCACAGAGGTGGCAAAATTCTCAGAAGTGTGTCGAGCACTTCTTATCTCAAGTGCCCGGAAAATCTGACTTATATTGCAGAATCTCCTTGGCCATCAATAAATTATTTAAATCCTGCAATAGTGCCATTTGGGGAACTTTCTCCATATCCCTCACGTTGTCCTGTTTCTGATGCTTTCATGCACACCACTCAAGTTTCAATCATCAGCTTGCTCCTATTGCTCCTTTGGATTTAGATTCTTTGCTTTCGTAATTTAAGTTTGAAGCTCGTGGACTGGCGCCTGCTCCTAGAGCCTCTCTGTTTTCGTAAGTTCATTATTCAAGCACCTGATCCTCCTCAATTTCATCCTCAACTTCCAAATTGTTGTTCTGGCTTGCGCTTTCAGAATTCGCTCTGTTTCGATTGTGAGCTCAAGGATATGGCGTTGAAGGCATCCGGAGCTTACAAGCATTGCACCCCCTGCAACGTACCACAGACACAGAATCGACTCAGAACCAGTACTGAGTCAGATGCGGAGTCGGATCGGTTCCGATGGTCCTACCGGCGAACGGCGAGCTCAAACTCGGCAACGACGAGGACATGGGGGAAGGAGATGGAAGCGAGGCTGAAGGGGATTTCGAGTGGGGAGGAGACACCGAACTCTGCCAGTGGACGGCGGGTGGAGCCGGTGGTGCTGTTCGTCGAAGAGAACGAACCTAAGGAGTGGGTGGCGCAGAATTGGACCCTGCTGCATCAAGCTAATAGTGATGTGATGATAATGACAATGAGGGCCTTTTCCTCCGGGGAACTGTCAATTTGTCTCACATCACTAATGGTGGACGTGGACAGAGCCAAGTTCTTAGGTTATCGTGGATTTACGATCAGTGGTCCTTTAACCCGGTCTTTGTTGTCTGGTGGAGGAATTTGTTGTCTTGTGTTCGCGTCAGGACAGAAACTTTTTCGAGAAAAGTATAACAAATGGCAAGCGCAAAAATGGTGGGCAGAGAACTACGAAAGGGTCATGGAACTTTACAACGTTCAGAAGCTTAATCGCCAAGCCTTCCCTCTTCCAACACCACCAAGATCTGAAGATGAGCTCTCAAAGCTTGAACCAGCAGAAGATATCCCAGTGACACCTCCACTAACCAAAGAACGATTACCTCGCAATCTAAATCGACCAACAGGGATGGGAACGGGATACTCATCATCGGATTCTTTTGACCATGGTTCAATGCAGTCCCGCCACCATCATGACTCGGGTGGCCTCAACTCAACCCCTAAAGTCTCCACCATAAGCACGGCCAAGACAGAAGCATCATCCATGGACGCCTCTATCAGAAGCAGCTCATCCAGAGAGGCTGATCCTTCAGGGGATATATCAATCAGCAATGCCAGTGATCAAGACGCTGAATGGGTCGAACAGGATGAACCTGGTGTTTATCTTACTATCAGAGCATTGCCAGGTGGTAAAAGGGAGCTAAGACGAGTCAGATTCAGGCTTGAGGTTTCTGATTCTTGTCACCTGAACCAACCGTATAGAATAAATTTCCTGGTATTTAATTTTCTTACTTGTGGTGCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAATCGAGCGAGGATACATGAACAATACTTGTGAGATTGAGGAAACAAAGTGGGTGACTGAGGAGATGAGGTGA 2613 0.4834 MRSDIQFLVGLALSSILCLVQTKSIIELCSSSDSCFSLLSFVVPWDSKLSEIASRFQVNVSDILTANSVFPISQKLSDQIIRSKSVVKIPISCGCVDGIRRSKSIYTVQASDTLETISEGFGGLVSADQIATGNSINATNRLTNGGRLAISLPCTCLNNVRNGETTVYMSYVVRERESLRSIASGSKTTGSDLEAVNGLSHDAVEPGDVIAIPIAACSSATLKWFAFAACSSATLNWYNESLIVPNGSYALTASDCIKCSCGPIDLRLQCYPSGLPVPCFNLQCKDSNLVIGDRHVTYSKPGCNVSQCLYRGHRGGKILRSVSSTSYLKCPENLTYIAESPWPSINYLNPAIVPFGELSPYPSRCPVSDAFMHTTQVSIISLLLLLLWIXILCFRNLSLKLVDWRLLLEPLCFRKFIIQAPDPPQFHPQLPNCCSGLRFQNSLCFDCELKDMALKASGAYKHCTPCNVPQTQNRLRTSTESDAESDRFRWSYRRTASSNSATTRTWGKEMEARLKGISSGEETPNSASGRRVEPVVLFVEENEPKEWVAQNWTLLHQANSDVMIMTMRAFSSGELSICLTSLMVDVDRAKFLGYRGFTISGPLTRSLLSGGGICCLVFASGQKLFREKYNKWQAQKWWAENYERVMELYNVQKLNRQAFPLPTPPRSEDELSKLEPAEDIPVTPPLTKERLPRNLNRPTGMGTGYSSSDSFDHGSMQSRHHHDSGGLNSTPKVSTISTAKTEASSMDASIRSSSSREADPSGDISISNASDQDAEWVEQDEPGVYLTIRALPGGKRELRRVRFRLEVSDSCHLNQPYRINFLVFNFLTCGAAEKNLGRCMLDYGGKRIERGYMNNTCEIEETKWVTEEMR 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0456 870 PANTHER PROTEIN BREVIS RADIX-LIKE 1 448 551 IPR044532 -
Lele45g0456 870 Gene3D LysM domain 100 159 IPR036779 -
Lele45g0456 870 ProSiteProfiles BRX domain profile. 774 844 IPR013591 -
Lele45g0456 870 Pfam Transcription factor regulating root and shoot growth via Pin3 774 804 IPR013591 -
Lele45g0456 870 MobiDBLite consensus disorder prediction 658 776 - -
Lele45g0456 870 CDD LysM 105 150 IPR018392 -
Lele45g0456 870 SMART LysM_2 49 90 IPR018392 -
Lele45g0456 870 SMART LysM_2 170 213 IPR018392 -
Lele45g0456 870 SMART LysM_2 105 151 IPR018392 -
Lele45g0456 870 Gene3D LysM domain 160 221 IPR036779 -
Lele45g0456 870 Pfam Transcription factor BRX N-terminal domain 446 466 IPR027988 -
Lele45g0456 870 ProSiteProfiles LysM domain profile. 104 150 IPR018392 -
Lele45g0456 870 SUPERFAMILY LysM domain 169 213 IPR036779 -
Lele45g0456 870 MobiDBLite consensus disorder prediction 699 713 - -
Lele45g0456 870 Pfam LysM domain 106 145 IPR018392 -
Lele45g0456 870 Pfam LysM domain 49 90 IPR018392 -
Lele45g0456 870 Pfam LysM domain 171 213 IPR018392 -
Lele45g0456 870 MobiDBLite consensus disorder prediction 721 773 - -
Lele45g0456 870 ProSiteProfiles LysM domain profile. 169 212 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0456 Lele-ChrLele45 3555458 3565522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0456 7 331 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 42.073 1.56e-68 232