Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0437 ATGCAAGACTCAGCGTTATTTCAGTCCATGAAAAGCCATGGATTTCCAGAACAAGAACAGGTCAAGTGCCCACGTTGTGATTCCACGAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCGCAACCACGACATTTCTGCAAGAGTTGCAGAAGGTACTGGACCAAGGGAGGCACTCTCCGCAACATCCCCGTCGGAGGTGGAAGCCGAAAGAACAAAAAGCTATCATCCACCAGCGCCAAACGAGTATCTGCAACGTCATCTTCACCATCATCTTCATCTTCTCCGTCGGTTTCGTCGGCCATTGGAGGCGCAGACCCTACCCGTGTTTATACCACCTCGATGGGTGGGAGTTTCAGTTCGCTTCTGGCTTCATCATCATCATCATCTGGGCATCTGGGTAGTGTTCTGGAGGGTCTGAATCCAAATGGGTCGGGTCTGAAAATGGCGGAAGCGGGTGAATTTGGGGCGAATACGAGTTCGGAGATGCAGATTAATGGCGTATCAGAGAGGTTTCCGGGTTTGCAGAATGGTGATTCGAGCTATTGGAATAGCAGTAACGAGTGGTCTAACCTTACCATGTATGCGCCAGGCTCGAGCTTTCAGTAG 612 0.5 MQDSALFQSMKSHGFPEQEQVKCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGTLRNIPVGGGSRKNKKLSSTSAKRVSATSSSPSSSSSPSVSSAIGGADPTRVYTTSMGGSFSSLLASSSSSSGHLGSVLEGLNPNGSGLKMAEAGEFGANTSSEMQINGVSERFPGLQNGDSSYWNSSNEWSNLTMYAPGSSFQ 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0437 203 MobiDBLite consensus disorder prediction 62 104 - -
Lele44g0437 203 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
Lele44g0437 203 MobiDBLite consensus disorder prediction 72 103 - -
Lele44g0437 203 ProSitePatterns Zinc finger Dof-type signature. 23 59 IPR003851 GO:0003677|GO:0006355
Lele44g0437 203 Pfam Dof domain, zinc finger 19 75 IPR003851 GO:0003677|GO:0006355
Lele44g0437 203 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 157 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0437 Lele-ChrLele44 3267023 3267634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0437 15 132 C2C2-Dof Transcription Factor Family AT1G51700 56.154 4.82e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele44g0437 zf-Dof 2.7e-34 No_clan