Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0233 ATGGAAGGGAATATAGAAGGGAACAATAATAATAAAGTAGGTTTAGAGAAGACGACAAGGCCACAAGAACAACTGAATTGTCCAAGATGCAATTCTACAAACACCAAGTTCTGCTACTACAACAATTATAGCCTCACACAACCCAGATACTTCTGCAAAACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGAGGAGGTTCCAGAAAGAACAAGAAGCTCATCACTACAACTAATTCTTCATCTTCATCAAAGCTTCTTCCCGACTTGAATCCACCATCAACTCCTGTTCCTTCTAATTCTTCTTCTTCTCAGAACCCTAAAATGTTAATGCAAGGAGGCCAAGATCTTAATCTGGCTTTCCCACCTATTATGGAGAATTATGACCATAATCATGGGCTTAGTTATCAAAGCTCTTCGTCTTCTTCTTCTACTTCTGCTTTGATGCTTCTGAGAGCAGGCATGGCTTCTAATAATCATCATCATCATCCTTTTGTTCATAATCCGATACTGATGCAAAACGCATCAAATAATGCACTTTTCCCTTCTGGGTTTAATTCCATGCATGAGGTTAAGCCAGCAAGCCTTGGATTTTCAGTGGATGATCATCATCATCAAGGGCTTCGAAGCAGATATGGTGTTCATCATCAAGAGAATAATAATAATATTAATGCTGGTGGAGGCAGGTTATTGTTTCCTTTTGGAGATGTCAAGCCGATTTCAGGAACTCATGAAGTTGAAGAAAATAACAAAGAACATGCAGCTGGGAATTCATCTTCTGGGTATTGGACTGGAATGGTTGGTGAAGGATCCTGGTAA 837 0.4038 MEGNIEGNNNNKVGLEKTTRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLITTTNSSSSSKLLPDLNPPSTPVPSNSSSSQNPKMLMQGGQDLNLAFPPIMENYDHNHGLSYQSSSSSSSTSALMLLRAGMASNNHHHHPFVHNPILMQNASNNALFPSGFNSMHEVKPASLGFSVDDHHHQGLRSRYGVHHQENNNNINAGGGRLLFPFGDVKPISGTHEVEENNKEHAAGNSSSGYWTGMVGEGSW 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0233 278 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Lele44g0233 278 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Lele44g0233 278 MobiDBLite consensus disorder prediction 66 117 - -
Lele44g0233 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 178 IPR045174 GO:0003700|GO:0006355
Lele44g0233 278 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
Lele44g0233 278 MobiDBLite consensus disorder prediction 254 278 - -
Lele44g0233 278 MobiDBLite consensus disorder prediction 1 26 - -
Lele44g0233 278 MobiDBLite consensus disorder prediction 77 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0233 Lele-ChrLele44 1591201 1592037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0233 17 278 C2C2-Dof Transcription Factor Family AT3G61850 45.965 2.83e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele44g0233 zf-Dof 2.3e-33 No_clan