Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0670 ATGAATTCACTTCAAATCACAGTGAAGAGGATGGGACTGAATTCTGACAGATACAGAACATCTTTGGTTGTTCTCTGCACAATTTTGCTTATAGTAAGTGGTGTTAGTTTTAAATACTCATTTTTAGATCATTTTGGGAACTTTTCTAAAGACAAGGCATTTCAAGTGGGGGGCCAAAACTTGACACATAAGAACTTGGGATCAGTAATTCAAGCTAATGCAGATTCACAAGGGAGAGGCCAAAACTTGACACATGACAACTTGGGACCAAAAACTCAGGCTACTGCGCATTCAGAACTTATCAATATCTTCTCTTACAAATTTGTAGCTTCAAAAAACTGTTCATTCACAAACTCAACAAAGGATTCATCATCCCCACTTATCAGAAAGCCTACTGCTGACAAACTTCTTGATGGGCTTCTATCTTCTGAGTTTGATAAATCACCATGCTTAAGCAGATTTCAGTCCTACTTATACCGTAAGGCTTCGCCTCGCAGACCGTCTCATTATCTGATAACAAAACTTCGCGAATACGAAGATCTTCATAAAAGGTGTGGACCTCATACCAGACTCTACAACAAAACCATGAAAGAGCTGATAAGGCCTAGGAAAAAGGGACATTATTCTGCAGAATGTAACTACATTTTGTGGACTTCTGTTAATGGCTTAGGGAACAGAATGGTGAGCATGTCTTCTGCATTCCTATACGCTCTTCTCACCGATCGAGTTCTATTGGTGGATTTCGAGGATGACATGACTGGCCTATTTTGTGAACCATTTCCTAATTCATCATGGATTTTGCCAAATGATTTTCCCTTCAGAAACAGGACAAGACATATAATTGAAACATATCAGAACATGATAAAGAAGGATAGAGAAAACAATAGTTCAAGGCAGATTTCTTCTCCATTGGTTCTACATCTAAATCTACAGCATACCAGTGATGATCATGAGAAGTTCTTTCACTGTGACCATAGCCAACAACTTCTAAGTAAGGTTCCCTTGTTGATATTGAGATCAGACCAATATTTCATACCTTCTCTGTTCATAATTCCATCTCTCAGTCAAGAATTAAGTAAAATGTTCCCAGAAAAAGACACTGTTTTTCACCACTTAGGAAGATACTTATTTCTACCTTCAAATCAGGTTTGGGGAATAATCAGCAGATTTTATCAGGCATACATGGCTAGGGCAGATGAAAGAATTGGTCTTCAAATCAGAGTATATCCTGATCTTTCTACAAATCAAGCAAAAATGGATCAAATATTAAGATGCACTTTAAGGAACAAGGTATTGCCGGAACTAGACCAGAGAGATTCGGTAACTTCTTCTCCAAGGAAGAACCTGACAAAATCTGTTCTGGTAACATCGTTGTATTCGTATTTCAGCGAGCATTTAAGGGCTATGTATTTGAGAAAACCGACTGTTACTGGGGACATAATAGGATTTTATCAGCCAAGTCATGAAGAGGAACAGAAGTTTAATGACAACATGCACAATGTAAAGGCTTTGACTGAAATTTATCTGCTTAGTATGTGTGATGTATTGGTGACTAGCTCTATATCTTCTTTTGGGTATGTAGCTCAAGGTTTGGGAGGCTTGAAGCCATGGATTCTTCATAAGTTACTAGACACTAACATCCCAGATCCTCCTTGCGTACCAGACTTCTCGATGGAGCCGTGTTTTCATTATCCACCTATGCATGATTGCATGGCAAAGCCTATGGATGAAAATGGTAAAGCTTTACCTTATTCAAGACCATGTTTGGATCAAGGAATTGGAATCAAGCTGGTTGATCATTGA 1803 0.3844 MNSLQITVKRMGLNSDRYRTSLVVLCTILLIVSGVSFKYSFLDHFGNFSKDKAFQVGGQNLTHKNLGSVIQANADSQGRGQNLTHDNLGPKTQATAHSELINIFSYKFVASKNCSFTNSTKDSSSPLIRKPTADKLLDGLLSSEFDKSPCLSRFQSYLYRKASPRRPSHYLITKLREYEDLHKRCGPHTRLYNKTMKELIRPRKKGHYSAECNYILWTSVNGLGNRMVSMSSAFLYALLTDRVLLVDFEDDMTGLFCEPFPNSSWILPNDFPFRNRTRHIIETYQNMIKKDRENNSSRQISSPLVLHLNLQHTSDDHEKFFHCDHSQQLLSKVPLLILRSDQYFIPSLFIIPSLSQELSKMFPEKDTVFHHLGRYLFLPSNQVWGIISRFYQAYMARADERIGLQIRVYPDLSTNQAKMDQILRCTLRNKVLPELDQRDSVTSSPRKNLTKSVLVTSLYSYFSEHLRAMYLRKPTVTGDIIGFYQPSHEEEQKFNDNMHNVKALTEIYLLSMCDVLVTSSISSFGYVAQGLGGLKPWILHKLLDTNIPDPPCVPDFSMEPCFHYPPMHDCMAKPMDENGKALPYSRPCLDQGIGIKLVDH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0670 600 FunFam Galactoside 2-alpha-L-fucosyltransferase 210 261 - -
Lele43g0670 600 Gene3D - 209 263 - -
Lele43g0670 600 PANTHER FUCOSYLTRANSFERASE 2-RELATED 45 599 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele43g0670 600 Pfam Xyloglucan fucosyltransferase 115 570 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0670 Lele-ChrLele43 5988076 5990756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0670 100 599 Xyloglucan Fucosyltransferase1 AT1G14100 49.116 2.66e-167 485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0717 42 20204755 20207571 Lele43g0670 43 5988076 5990756 hybridization
Lele37g0556 37 4598976 4613602 Lele43g0670 43 5988076 5990756 PCT