Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0447 ATGCAAGACCCAACGTTATTTCAATCCATGAAAAGCCATGGATTCCCAGAACAAGAACAGGTGAAGTGCCCACGTTGTGATTCCACGAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCGCAACCACGCCATTTCTGCAAGACTTGCAGAAGGTACTGGACCAAGGGAGGCGCTCTCCGCAACGTCCCCGTTGGAGGAGGAAGCCGGAAGAACAGAAAGCGATCATCCACCAGCGCCAAACGATTATCTGCAACGTCATCTTCACCATCATCATCATCTTCTCCGTCGGTTTCATCGGCCATTGGAGGCGCATACCCGACCAGTGTTTATTCCGCCTCGATGGGTGGGAGTTTCAGTTCGCTTCTGGCATCATCATCGTCATCTGGGCATCTGAGGAGTGTTCTGGAGAGTTTGAATCCAAATGGGTCGGTTCTGAAAATGGCGGAAGCGGGTGAATTTGGGGCGAAGATGAGCTCTGTTGAACGGGTTGTGGATCCTAATGCGGAGATACAGATTAATGGAGTTTCAGAGACACACAACAAAATTTTCTTCAGCCCAATCTAG 570 0.4947 MQDPTLFQSMKSHGFPEQEQVKCPRCDSTNTKFCYYNNYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGSRKNRKRSSTSAKRLSATSSSPSSSSSPSVSSAIGGAYPTSVYSASMGGSFSSLLASSSSSGHLRSVLESLNPNGSVLKMAEAGEFGAKMSSVERVVDPNAEIQINGVSETHNKIFFSPI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0447 189 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
Lele43g0447 189 MobiDBLite consensus disorder prediction 80 100 - -
Lele43g0447 189 MobiDBLite consensus disorder prediction 62 100 - -
Lele43g0447 189 ProSitePatterns Zinc finger Dof-type signature. 23 59 IPR003851 GO:0003677|GO:0006355
Lele43g0447 189 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 139 IPR045174 GO:0003700|GO:0006355
Lele43g0447 189 Pfam Dof domain, zinc finger 19 75 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0447 Lele-ChrLele43 3929036 3929605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0447 15 133 C2C2-Dof Transcription Factor Family AT1G51700 56.489 9.16e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele43g0447 zf-Dof 3e-33 No_clan